Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.49■□□□□ 0.23
BRF2Q9HAW0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 AC092068.3-201ENST00000587894 2016 ntBASIC16.48■□□□□ 0.23
BRF2Q9HAW0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 PRYP5-201ENST00000451909 266 ntBASIC16.48■□□□□ 0.23
BRF2Q9HAW0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 AC138894.3-201ENST00000603787 634 ntBASIC16.48■□□□□ 0.23
BRF2Q9HAW0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.48■□□□□ 0.23
BRF2Q9HAW0 AC097637.2-201ENST00000624096 1997 ntBASIC16.47■□□□□ 0.23
BRF2Q9HAW0 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRF2Q9HAW0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRF2Q9HAW0 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRF2Q9HAW0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BRF2Q9HAW0 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRF2Q9HAW0 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRF2Q9HAW0 UPK3BP1-201ENST00000428678 509 ntBASIC16.47■□□□□ 0.23
BRF2Q9HAW0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BRF2Q9HAW0 AC106795.1-205ENST00000512851 1056 ntBASIC16.47■□□□□ 0.23
BRF2Q9HAW0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.47■□□□□ 0.23
BRF2Q9HAW0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.47■□□□□ 0.23
BRF2Q9HAW0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
BRF2Q9HAW0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.47■□□□□ 0.23
BRF2Q9HAW0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRF2Q9HAW0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
BRF2Q9HAW0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.47■□□□□ 0.23
BRF2Q9HAW0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
BRF2Q9HAW0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.47■□□□□ 0.23
BRF2Q9HAW0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
BRF2Q9HAW0 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRF2Q9HAW0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRF2Q9HAW0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRF2Q9HAW0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.47■□□□□ 0.23
BRF2Q9HAW0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRF2Q9HAW0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
BRF2Q9HAW0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms