Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC68Q9H2F9 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC68Q9H2F9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CCDC68Q9H2F9 PCDHA12-202ENST00000613593 2588 ntBASIC17.33■□□□□ 0.36
CCDC68Q9H2F9 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC68Q9H2F9 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC68Q9H2F9 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC68Q9H2F9 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC68Q9H2F9 AC096582.2-201ENST00000510860 516 ntBASIC17.33■□□□□ 0.36
CCDC68Q9H2F9 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC68Q9H2F9 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC68Q9H2F9 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC68Q9H2F9 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC68Q9H2F9 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC68Q9H2F9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC68Q9H2F9 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC68Q9H2F9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC68Q9H2F9 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC68Q9H2F9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CCDC68Q9H2F9 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC68Q9H2F9 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC68Q9H2F9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC68Q9H2F9 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC68Q9H2F9 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC68Q9H2F9 AL049757.1-201ENST00000616842 1596 ntBASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 TP73-AS1-210ENST00000637775 1455 ntBASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 AP002383.4-201ENST00000442518 975 ntBASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 AC104819.1-201ENST00000504587 486 ntBASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 AP005901.3-202ENST00000581653 237 ntBASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 AC011467.2-201ENST00000598425 242 ntBASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
CCDC68Q9H2F9 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 KRT8P10-201ENST00000450021 1447 ntBASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 STK19B-204ENST00000512515 211 ntBASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 AP000867.3-201ENST00000524675 377 ntBASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 AC074051.2-201ENST00000565115 352 ntBASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms