Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CGREF1Q99674 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CGREF1Q99674 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.42■□□□□ 0.22
CGREF1Q99674 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.42■□□□□ 0.22
CGREF1Q99674 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.42■□□□□ 0.22
CGREF1Q99674 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.42■□□□□ 0.22
CGREF1Q99674 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGREF1Q99674 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.42■□□□□ 0.22
CGREF1Q99674 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGREF1Q99674 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGREF1Q99674 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGREF1Q99674 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGREF1Q99674 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGREF1Q99674 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CGREF1Q99674 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGREF1Q99674 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CGREF1Q99674 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGREF1Q99674 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CGREF1Q99674 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.42■□□□□ 0.22
CGREF1Q99674 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGREF1Q99674 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGREF1Q99674 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CGREF1Q99674 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
CGREF1Q99674 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.41■□□□□ 0.22
CGREF1Q99674 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.41■□□□□ 0.22
CGREF1Q99674 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGREF1Q99674 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CGREF1Q99674 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGREF1Q99674 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGREF1Q99674 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CGREF1Q99674 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGREF1Q99674 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.41■□□□□ 0.22
CGREF1Q99674 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.41■□□□□ 0.22
CGREF1Q99674 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGREF1Q99674 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGREF1Q99674 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.41■□□□□ 0.22
CGREF1Q99674 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CGREF1Q99674 AC007967.3-201ENST00000434308 558 ntBASIC16.41■□□□□ 0.22
CGREF1Q99674 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.41■□□□□ 0.22
CGREF1Q99674 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGREF1Q99674 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGREF1Q99674 AL359075.1-203ENST00000462729 1002 ntBASIC16.41■□□□□ 0.22
CGREF1Q99674 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CGREF1Q99674 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
CGREF1Q99674 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.41■□□□□ 0.22
CGREF1Q99674 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.41■□□□□ 0.22
CGREF1Q99674 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.41■□□□□ 0.22
CGREF1Q99674 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.41■□□□□ 0.22
CGREF1Q99674 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CGREF1Q99674 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.41■□□□□ 0.22
CGREF1Q99674 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
CGREF1Q99674 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.41■□□□□ 0.22
CGREF1Q99674 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.41■□□□□ 0.22
CGREF1Q99674 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.41■□□□□ 0.22
CGREF1Q99674 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CGREF1Q99674 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.41■□□□□ 0.22
CGREF1Q99674 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CGREF1Q99674 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CGREF1Q99674 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CGREF1Q99674 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGREF1Q99674 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGREF1Q99674 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGREF1Q99674 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.4■□□□□ 0.22
CGREF1Q99674 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.4■□□□□ 0.22
CGREF1Q99674 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGREF1Q99674 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGREF1Q99674 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGREF1Q99674 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CGREF1Q99674 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGREF1Q99674 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGREF1Q99674 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CGREF1Q99674 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.4■□□□□ 0.22
CGREF1Q99674 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGREF1Q99674 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGREF1Q99674 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGREF1Q99674 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CGREF1Q99674 HBZP1-201ENST00000354915 429 ntBASIC16.4■□□□□ 0.22
CGREF1Q99674 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CGREF1Q99674 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.4■□□□□ 0.22
CGREF1Q99674 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CGREF1Q99674 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.4■□□□□ 0.22
CGREF1Q99674 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGREF1Q99674 AC006449.5-201ENST00000610658 2098 ntBASIC16.4■□□□□ 0.22
CGREF1Q99674 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGREF1Q99674 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGREF1Q99674 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGREF1Q99674 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.4■□□□□ 0.22
CGREF1Q99674 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGREF1Q99674 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.4■□□□□ 0.22
CGREF1Q99674 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGREF1Q99674 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.4■□□□□ 0.22
CGREF1Q99674 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGREF1Q99674 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CGREF1Q99674 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.4■□□□□ 0.22
CGREF1Q99674 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGREF1Q99674 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CGREF1Q99674 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.39■□□□□ 0.22
CGREF1Q99674 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
CGREF1Q99674 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
CGREF1Q99674 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms