Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.79■□□□□ 0.28
PKP4Q99569 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PKP4Q99569 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PKP4Q99569 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.79■□□□□ 0.28
PKP4Q99569 AC079781.3-201ENST00000449110 356 ntBASIC16.79■□□□□ 0.28
PKP4Q99569 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PKP4Q99569 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.79■□□□□ 0.28
PKP4Q99569 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.79■□□□□ 0.28
PKP4Q99569 AC025062.2-201ENST00000605477 670 ntBASIC16.79■□□□□ 0.28
PKP4Q99569 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.79■□□□□ 0.28
PKP4Q99569 TP73-AS1-207ENST00000624167 988 ntBASIC16.79■□□□□ 0.28
PKP4Q99569 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PKP4Q99569 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKP4Q99569 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.79■□□□□ 0.28
PKP4Q99569 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.79■□□□□ 0.28
PKP4Q99569 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
PKP4Q99569 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PKP4Q99569 AC080080.1-201ENST00000625121 2420 ntBASIC16.79■□□□□ 0.28
PKP4Q99569 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
PKP4Q99569 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PKP4Q99569 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PKP4Q99569 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.79■□□□□ 0.28
PKP4Q99569 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PKP4Q99569 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.78■□□□□ 0.28
PKP4Q99569 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKP4Q99569 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKP4Q99569 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKP4Q99569 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKP4Q99569 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKP4Q99569 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKP4Q99569 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKP4Q99569 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PKP4Q99569 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.78■□□□□ 0.28
PKP4Q99569 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.78■□□□□ 0.28
PKP4Q99569 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKP4Q99569 EGFEM1P-202ENST00000431685 1563 ntBASIC16.78■□□□□ 0.28
PKP4Q99569 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PKP4Q99569 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PKP4Q99569 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PKP4Q99569 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
PKP4Q99569 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PKP4Q99569 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PKP4Q99569 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.78■□□□□ 0.28
PKP4Q99569 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PKP4Q99569 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.78■□□□□ 0.28
PKP4Q99569 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.78■□□□□ 0.28
PKP4Q99569 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.78■□□□□ 0.28
PKP4Q99569 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.78■□□□□ 0.28
PKP4Q99569 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.78■□□□□ 0.28
PKP4Q99569 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.78■□□□□ 0.28
PKP4Q99569 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PKP4Q99569 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
PKP4Q99569 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.78■□□□□ 0.28
PKP4Q99569 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.78■□□□□ 0.28
PKP4Q99569 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PKP4Q99569 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PKP4Q99569 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKP4Q99569 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PKP4Q99569 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PKP4Q99569 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.78■□□□□ 0.28
PKP4Q99569 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
PKP4Q99569 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.78■□□□□ 0.28
PKP4Q99569 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.78■□□□□ 0.28
PKP4Q99569 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKP4Q99569 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PKP4Q99569 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PKP4Q99569 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.77■□□□□ 0.28
PKP4Q99569 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.77■□□□□ 0.28
PKP4Q99569 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PKP4Q99569 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PKP4Q99569 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PKP4Q99569 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PKP4Q99569 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PKP4Q99569 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
PKP4Q99569 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.28
PKP4Q99569 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PKP4Q99569 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PKP4Q99569 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.77■□□□□ 0.28
PKP4Q99569 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PKP4Q99569 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.77■□□□□ 0.28
PKP4Q99569 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.77■□□□□ 0.28
PKP4Q99569 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.77■□□□□ 0.28
PKP4Q99569 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.77■□□□□ 0.28
PKP4Q99569 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.77■□□□□ 0.28
PKP4Q99569 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PKP4Q99569 AL353135.1-201ENST00000606729 504 ntBASIC16.77■□□□□ 0.28
PKP4Q99569 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PKP4Q99569 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.77■□□□□ 0.27
PKP4Q99569 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PKP4Q99569 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
PKP4Q99569 NCF1C-201ENST00000438382 1427 ntBASIC16.77■□□□□ 0.27
PKP4Q99569 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.77■□□□□ 0.27
PKP4Q99569 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
PKP4Q99569 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PKP4Q99569 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PKP4Q99569 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
PKP4Q99569 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.76■□□□□ 0.27
PKP4Q99569 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PKP4Q99569 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PKP4Q99569 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms