Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 AC106795.1-205ENST00000512851 1056 ntBASIC16.1■□□□□ 0.17
MS4A4EQ96PG1 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
MS4A4EQ96PG1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.1■□□□□ 0.17
MS4A4EQ96PG1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
MS4A4EQ96PG1 AL732292.2-201ENST00000609649 430 ntBASIC16.1■□□□□ 0.17
MS4A4EQ96PG1 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MS4A4EQ96PG1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MS4A4EQ96PG1 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
MS4A4EQ96PG1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MS4A4EQ96PG1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MS4A4EQ96PG1 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MS4A4EQ96PG1 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MS4A4EQ96PG1 PCDHA12-202ENST00000613593 2588 ntBASIC16.1■□□□□ 0.17
MS4A4EQ96PG1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
MS4A4EQ96PG1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MS4A4EQ96PG1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
MS4A4EQ96PG1 GPR89P-201ENST00000407924 1495 ntBASIC16.1■□□□□ 0.17
MS4A4EQ96PG1 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MS4A4EQ96PG1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 AC092053.1-201ENST00000605787 1936 ntBASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 AC009053.2-201ENST00000563701 2365 ntBASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MS4A4EQ96PG1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
MS4A4EQ96PG1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
MS4A4EQ96PG1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MS4A4EQ96PG1 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
MS4A4EQ96PG1 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A4EQ96PG1 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A4EQ96PG1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.08■□□□□ 0.16
MS4A4EQ96PG1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A4EQ96PG1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A4EQ96PG1 KRT18P31-201ENST00000506277 1292 ntBASIC16.08■□□□□ 0.16
MS4A4EQ96PG1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A4EQ96PG1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.08■□□□□ 0.16
MS4A4EQ96PG1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A4EQ96PG1 AL139288.1-201ENST00000623748 933 ntBASIC16.08■□□□□ 0.16
MS4A4EQ96PG1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A4EQ96PG1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.08■□□□□ 0.16
MS4A4EQ96PG1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
MS4A4EQ96PG1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A4EQ96PG1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.08■□□□□ 0.16
MS4A4EQ96PG1 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A4EQ96PG1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A4EQ96PG1 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A4EQ96PG1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A4EQ96PG1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A4EQ96PG1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A4EQ96PG1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
MS4A4EQ96PG1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A4EQ96PG1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A4EQ96PG1 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.08■□□□□ 0.16
MS4A4EQ96PG1 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A4EQ96PG1 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 AC097637.2-201ENST00000624096 1997 ntBASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms