Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.44■□□□□ 0.7
FGD4Q96M96 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.44■□□□□ 0.7
FGD4Q96M96 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.44■□□□□ 0.7
FGD4Q96M96 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
FGD4Q96M96 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FGD4Q96M96 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.44■□□□□ 0.7
FGD4Q96M96 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FGD4Q96M96 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FGD4Q96M96 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FGD4Q96M96 AC012317.2-201ENST00000623305 2251 ntBASIC19.44■□□□□ 0.7
FGD4Q96M96 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FGD4Q96M96 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
FGD4Q96M96 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.43■□□□□ 0.7
FGD4Q96M96 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FGD4Q96M96 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.43■□□□□ 0.7
FGD4Q96M96 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FGD4Q96M96 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FGD4Q96M96 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
FGD4Q96M96 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.43■□□□□ 0.7
FGD4Q96M96 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FGD4Q96M96 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FGD4Q96M96 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.43■□□□□ 0.7
FGD4Q96M96 AL355306.1-201ENST00000415580 579 ntBASIC19.43■□□□□ 0.7
FGD4Q96M96 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FGD4Q96M96 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.43■□□□□ 0.7
FGD4Q96M96 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.43■□□□□ 0.7
FGD4Q96M96 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.43■□□□□ 0.7
FGD4Q96M96 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.43■□□□□ 0.7
FGD4Q96M96 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FGD4Q96M96 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
FGD4Q96M96 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
FGD4Q96M96 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
FGD4Q96M96 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FGD4Q96M96 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
FGD4Q96M96 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FGD4Q96M96 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
FGD4Q96M96 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.42■□□□□ 0.7
FGD4Q96M96 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FGD4Q96M96 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.42■□□□□ 0.7
FGD4Q96M96 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
FGD4Q96M96 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FGD4Q96M96 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FGD4Q96M96 MIR770-201ENST00000390219 98 ntBASIC19.42■□□□□ 0.7
FGD4Q96M96 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.42■□□□□ 0.7
FGD4Q96M96 AC140658.5-201ENST00000438532 169 ntBASIC19.42■□□□□ 0.7
FGD4Q96M96 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
FGD4Q96M96 AC023141.5-201ENST00000458585 616 ntBASIC19.42■□□□□ 0.7
FGD4Q96M96 KRT8P48-201ENST00000515599 1220 ntBASIC19.42■□□□□ 0.7
FGD4Q96M96 AC112191.1-201ENST00000523689 701 ntBASIC19.42■□□□□ 0.7
FGD4Q96M96 MIR3197-201ENST00000582241 73 ntBASIC19.42■□□□□ 0.7
FGD4Q96M96 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FGD4Q96M96 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FGD4Q96M96 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
FGD4Q96M96 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FGD4Q96M96 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.42■□□□□ 0.7
FGD4Q96M96 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FGD4Q96M96 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FGD4Q96M96 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FGD4Q96M96 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FGD4Q96M96 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FGD4Q96M96 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FGD4Q96M96 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FGD4Q96M96 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.42■□□□□ 0.7
FGD4Q96M96 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
FGD4Q96M96 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
FGD4Q96M96 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.41■□□□□ 0.7
FGD4Q96M96 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FGD4Q96M96 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
FGD4Q96M96 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FGD4Q96M96 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FGD4Q96M96 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FGD4Q96M96 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
FGD4Q96M96 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.41■□□□□ 0.7
FGD4Q96M96 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FGD4Q96M96 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FGD4Q96M96 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
FGD4Q96M96 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FGD4Q96M96 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
FGD4Q96M96 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FGD4Q96M96 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FGD4Q96M96 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
FGD4Q96M96 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FGD4Q96M96 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FGD4Q96M96 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
FGD4Q96M96 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.41■□□□□ 0.7
FGD4Q96M96 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.41■□□□□ 0.7
FGD4Q96M96 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.41■□□□□ 0.7
FGD4Q96M96 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FGD4Q96M96 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FGD4Q96M96 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FGD4Q96M96 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FGD4Q96M96 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FGD4Q96M96 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.41■□□□□ 0.7
FGD4Q96M96 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
FGD4Q96M96 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
FGD4Q96M96 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FGD4Q96M96 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FGD4Q96M96 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FGD4Q96M96 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FGD4Q96M96 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms