Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.54■□□□□ 0.56
SNX27Q96L92 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SNX27Q96L92 AC020916.1-201ENST00000587762 1774 ntBASIC18.54■□□□□ 0.56
SNX27Q96L92 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNX27Q96L92 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX27Q96L92 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SNX27Q96L92 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX27Q96L92 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SNX27Q96L92 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SNX27Q96L92 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SNX27Q96L92 AC093525.9-201ENST00000624961 1746 ntBASIC18.54■□□□□ 0.56
SNX27Q96L92 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.54■□□□□ 0.56
SNX27Q96L92 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.54■□□□□ 0.56
SNX27Q96L92 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.54■□□□□ 0.56
SNX27Q96L92 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
SNX27Q96L92 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX27Q96L92 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNX27Q96L92 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.54■□□□□ 0.56
SNX27Q96L92 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.54■□□□□ 0.56
SNX27Q96L92 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SNX27Q96L92 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNX27Q96L92 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
SNX27Q96L92 LINC00896-202ENST00000609602 2128 ntBASIC18.53■□□□□ 0.56
SNX27Q96L92 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNX27Q96L92 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNX27Q96L92 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNX27Q96L92 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNX27Q96L92 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNX27Q96L92 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SNX27Q96L92 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
SNX27Q96L92 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SNX27Q96L92 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNX27Q96L92 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNX27Q96L92 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNX27Q96L92 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNX27Q96L92 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SNX27Q96L92 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.53■□□□□ 0.56
SNX27Q96L92 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.53■□□□□ 0.56
SNX27Q96L92 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.53■□□□□ 0.56
SNX27Q96L92 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.53■□□□□ 0.56
SNX27Q96L92 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.53■□□□□ 0.56
SNX27Q96L92 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.53■□□□□ 0.56
SNX27Q96L92 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SNX27Q96L92 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
SNX27Q96L92 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.53■□□□□ 0.56
SNX27Q96L92 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.53■□□□□ 0.56
SNX27Q96L92 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNX27Q96L92 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.53■□□□□ 0.56
SNX27Q96L92 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNX27Q96L92 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.53■□□□□ 0.56
SNX27Q96L92 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.53■□□□□ 0.56
SNX27Q96L92 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.53■□□□□ 0.56
SNX27Q96L92 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
SNX27Q96L92 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNX27Q96L92 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SNX27Q96L92 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
SNX27Q96L92 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNX27Q96L92 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNX27Q96L92 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SNX27Q96L92 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNX27Q96L92 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SNX27Q96L92 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNX27Q96L92 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.52■□□□□ 0.56
SNX27Q96L92 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNX27Q96L92 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.52■□□□□ 0.56
SNX27Q96L92 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNX27Q96L92 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNX27Q96L92 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNX27Q96L92 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.52■□□□□ 0.56
SNX27Q96L92 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.52■□□□□ 0.56
SNX27Q96L92 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.52■□□□□ 0.56
SNX27Q96L92 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.52■□□□□ 0.56
SNX27Q96L92 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.52■□□□□ 0.56
SNX27Q96L92 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
SNX27Q96L92 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SNX27Q96L92 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SNX27Q96L92 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.52■□□□□ 0.56
SNX27Q96L92 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.52■□□□□ 0.56
SNX27Q96L92 AC092865.6-201ENST00000642101 219 ntBASIC18.52■□□□□ 0.56
SNX27Q96L92 AC002310.6-201ENST00000624451 1377 ntBASIC18.52■□□□□ 0.55
SNX27Q96L92 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.52■□□□□ 0.55
SNX27Q96L92 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SNX27Q96L92 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNX27Q96L92 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNX27Q96L92 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNX27Q96L92 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.51■□□□□ 0.55
SNX27Q96L92 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.51■□□□□ 0.55
SNX27Q96L92 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.51■□□□□ 0.55
SNX27Q96L92 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SNX27Q96L92 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNX27Q96L92 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.51■□□□□ 0.55
SNX27Q96L92 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.51■□□□□ 0.55
SNX27Q96L92 AL645939.2-201ENST00000427340 991 ntBASIC18.51■□□□□ 0.55
SNX27Q96L92 RHOQP3-201ENST00000437982 621 ntBASIC18.51■□□□□ 0.55
SNX27Q96L92 CXCL1P1-201ENST00000502804 216 ntBASIC18.51■□□□□ 0.55
SNX27Q96L92 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.51■□□□□ 0.55
SNX27Q96L92 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
SNX27Q96L92 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.51■□□□□ 0.55
SNX27Q96L92 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.51■□□□□ 0.55
SNX27Q96L92 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms