Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPGRQ92834 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RPGRQ92834 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
RPGRQ92834 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RPGRQ92834 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RPGRQ92834 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RPGRQ92834 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC21.1■□□□□ 0.97
RPGRQ92834 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
RPGRQ92834 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.1■□□□□ 0.97
RPGRQ92834 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.1■□□□□ 0.97
RPGRQ92834 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RPGRQ92834 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPGRQ92834 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPGRQ92834 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.1■□□□□ 0.97
RPGRQ92834 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPGRQ92834 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPGRQ92834 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC21.1■□□□□ 0.97
RPGRQ92834 HNRNPA1P40-201ENST00000426371 1278 ntBASIC21.1■□□□□ 0.97
RPGRQ92834 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC21.1■□□□□ 0.97
RPGRQ92834 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC21.1■□□□□ 0.97
RPGRQ92834 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPGRQ92834 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC21.1■□□□□ 0.97
RPGRQ92834 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC21.1■□□□□ 0.97
RPGRQ92834 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPGRQ92834 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPGRQ92834 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPGRQ92834 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RPGRQ92834 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RPGRQ92834 LINC00304-203ENST00000565008 1864 ntBASIC21.09■□□□□ 0.97
RPGRQ92834 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.09■□□□□ 0.97
RPGRQ92834 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RPGRQ92834 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RPGRQ92834 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.09■□□□□ 0.97
RPGRQ92834 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPGRQ92834 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPGRQ92834 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RPGRQ92834 BAD-202ENST00000394531 631 ntTSL 3 BASIC21.09■□□□□ 0.97
RPGRQ92834 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPGRQ92834 AC236430.1-201ENST00000402231 743 ntBASIC21.09■□□□□ 0.97
RPGRQ92834 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RPGRQ92834 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPGRQ92834 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPGRQ92834 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPGRQ92834 BAD-207ENST00000544785 525 ntTSL 3 BASIC21.09■□□□□ 0.97
RPGRQ92834 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RPGRQ92834 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC21.09■□□□□ 0.97
RPGRQ92834 KRT8P23-201ENST00000560090 1207 ntBASIC21.09■□□□□ 0.97
RPGRQ92834 AC026150.2-201ENST00000564693 1156 ntBASIC21.09■□□□□ 0.97
RPGRQ92834 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPGRQ92834 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPGRQ92834 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPGRQ92834 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RPGRQ92834 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPGRQ92834 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPGRQ92834 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPGRQ92834 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
RPGRQ92834 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC21.09■□□□□ 0.97
RPGRQ92834 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC21.09■□□□□ 0.97
RPGRQ92834 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.09■□□□□ 0.97
RPGRQ92834 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.09■□□□□ 0.97
RPGRQ92834 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPGRQ92834 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPGRQ92834 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.09■□□□□ 0.97
RPGRQ92834 AC104581.1-202ENST00000635932 2618 ntBASIC21.08■□□□□ 0.97
RPGRQ92834 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.08■□□□□ 0.97
RPGRQ92834 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.97
RPGRQ92834 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RPGRQ92834 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPGRQ92834 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPGRQ92834 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
RPGRQ92834 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
RPGRQ92834 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RPGRQ92834 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
RPGRQ92834 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPGRQ92834 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPGRQ92834 VMA21-202ENST00000370361 693 ntTSL 5 BASIC21.08■□□□□ 0.97
RPGRQ92834 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPGRQ92834 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPGRQ92834 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC21.08■□□□□ 0.97
RPGRQ92834 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC21.08■□□□□ 0.97
RPGRQ92834 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC21.08■□□□□ 0.97
RPGRQ92834 TERF1P3-201ENST00000505638 1227 ntBASIC21.08■□□□□ 0.97
RPGRQ92834 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPGRQ92834 RAB34-224ENST00000636513 888 ntTSL 5 BASIC21.08■□□□□ 0.97
RPGRQ92834 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.08■□□□□ 0.96
RPGRQ92834 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPGRQ92834 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPGRQ92834 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPGRQ92834 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
RPGRQ92834 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPGRQ92834 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.08■□□□□ 0.96
RPGRQ92834 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPGRQ92834 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.08■□□□□ 0.96
RPGRQ92834 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
RPGRQ92834 FO538757.1-201ENST00000623083 1397 ntBASIC21.08■□□□□ 0.96
RPGRQ92834 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPGRQ92834 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.08■□□□□ 0.96
RPGRQ92834 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPGRQ92834 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RPGRQ92834 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms