Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.24■□□□□ 0.03
AP3S1Q92572 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.24■□□□□ 0.03
AP3S1Q92572 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
AP3S1Q92572 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.24■□□□□ 0.03
AP3S1Q92572 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 KRT8P47-201ENST00000604727 1398 ntBASIC15.24■□□□□ 0.03
AP3S1Q92572 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
AP3S1Q92572 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.23■□□□□ 0.03
AP3S1Q92572 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.23■□□□□ 0.03
AP3S1Q92572 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S1Q92572 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S1Q92572 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S1Q92572 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S1Q92572 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S1Q92572 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S1Q92572 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.23■□□□□ 0.03
AP3S1Q92572 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S1Q92572 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
AP3S1Q92572 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.23■□□□□ 0.03
AP3S1Q92572 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.23■□□□□ 0.03
AP3S1Q92572 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S1Q92572 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S1Q92572 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S1Q92572 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.23■□□□□ 0.03
AP3S1Q92572 SLC25A1P3-201ENST00000395415 828 ntBASIC15.23■□□□□ 0.03
AP3S1Q92572 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.23■□□□□ 0.03
AP3S1Q92572 KRT18P65-201ENST00000439811 1286 ntBASIC15.23■□□□□ 0.03
AP3S1Q92572 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.23■□□□□ 0.03
AP3S1Q92572 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC15.23■□□□□ 0.03
AP3S1Q92572 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.23■□□□□ 0.03
AP3S1Q92572 AC124016.1-201ENST00000609552 612 ntBASIC15.23■□□□□ 0.03
AP3S1Q92572 DGCR10-201ENST00000609839 495 ntBASIC15.23■□□□□ 0.03
AP3S1Q92572 AC133041.1-202ENST00000642053 222 ntBASIC15.23■□□□□ 0.03
AP3S1Q92572 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S1Q92572 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S1Q92572 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
AP3S1Q92572 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S1Q92572 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S1Q92572 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S1Q92572 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S1Q92572 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.23■□□□□ 0.03
AP3S1Q92572 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
AP3S1Q92572 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S1Q92572 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
AP3S1Q92572 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S1Q92572 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.23■□□□□ 0.03
AP3S1Q92572 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S1Q92572 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S1Q92572 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.22■□□□□ 0.03
AP3S1Q92572 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.22■□□□□ 0.03
AP3S1Q92572 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S1Q92572 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S1Q92572 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S1Q92572 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S1Q92572 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S1Q92572 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
AP3S1Q92572 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
AP3S1Q92572 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
AP3S1Q92572 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S1Q92572 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
AP3S1Q92572 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S1Q92572 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S1Q92572 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.22■□□□□ 0.03
AP3S1Q92572 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S1Q92572 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S1Q92572 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S1Q92572 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S1Q92572 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S1Q92572 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.22■□□□□ 0.03
AP3S1Q92572 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
AP3S1Q92572 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.22■□□□□ 0.03
AP3S1Q92572 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.22■□□□□ 0.03
AP3S1Q92572 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.22■□□□□ 0.03
AP3S1Q92572 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.22■□□□□ 0.03
AP3S1Q92572 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.22■□□□□ 0.03
AP3S1Q92572 WT1-AS_3.1-201ENST00000613262 234 ntBASIC15.22■□□□□ 0.03
AP3S1Q92572 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.22■□□□□ 0.03
AP3S1Q92572 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S1Q92572 AC092850.2-201ENST00000623821 2697 ntBASIC15.22■□□□□ 0.03
AP3S1Q92572 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S1Q92572 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.22■□□□□ 0.03
AP3S1Q92572 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S1Q92572 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S1Q92572 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S1Q92572 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.22■□□□□ 0.03
AP3S1Q92572 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
AP3S1Q92572 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S1Q92572 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S1Q92572 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S1Q92572 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms