Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
STAG1Q8WVM7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
STAG1Q8WVM7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 AC092053.1-201ENST00000605787 1936 ntBASIC20.24■□□□□ 0.83
STAG1Q8WVM7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.24■□□□□ 0.83
STAG1Q8WVM7 AL591424.1-201ENST00000442569 1213 ntBASIC20.24■□□□□ 0.83
STAG1Q8WVM7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 AC124947.2-201ENST00000547118 1133 ntBASIC20.24■□□□□ 0.83
STAG1Q8WVM7 DUX4L17-201ENST00000557360 1267 ntBASIC20.24■□□□□ 0.83
STAG1Q8WVM7 OR7E47P-204ENST00000575924 449 ntBASIC20.24■□□□□ 0.83
STAG1Q8WVM7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 AC004790.2-201ENST00000623588 572 ntBASIC20.24■□□□□ 0.83
STAG1Q8WVM7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
STAG1Q8WVM7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
STAG1Q8WVM7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
STAG1Q8WVM7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
STAG1Q8WVM7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.23■□□□□ 0.83
STAG1Q8WVM7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
STAG1Q8WVM7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
STAG1Q8WVM7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
STAG1Q8WVM7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
STAG1Q8WVM7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
STAG1Q8WVM7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
STAG1Q8WVM7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
STAG1Q8WVM7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.23■□□□□ 0.83
STAG1Q8WVM7 MED15P5-201ENST00000423150 992 ntBASIC20.23■□□□□ 0.83
STAG1Q8WVM7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.23■□□□□ 0.83
STAG1Q8WVM7 PRSS29P-201ENST00000440800 595 ntBASIC20.23■□□□□ 0.83
STAG1Q8WVM7 SLC25A6P2-201ENST00000497974 877 ntBASIC20.23■□□□□ 0.83
STAG1Q8WVM7 PGAM5P1-201ENST00000518923 814 ntBASIC20.23■□□□□ 0.83
STAG1Q8WVM7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
STAG1Q8WVM7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
STAG1Q8WVM7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.23■□□□□ 0.83
STAG1Q8WVM7 AC006538.3-201ENST00000612495 578 ntBASIC20.23■□□□□ 0.83
STAG1Q8WVM7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.23■□□□□ 0.83
STAG1Q8WVM7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
STAG1Q8WVM7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
STAG1Q8WVM7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
STAG1Q8WVM7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
STAG1Q8WVM7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
STAG1Q8WVM7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
STAG1Q8WVM7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
STAG1Q8WVM7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
STAG1Q8WVM7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
STAG1Q8WVM7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
STAG1Q8WVM7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
STAG1Q8WVM7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.22■□□□□ 0.83
STAG1Q8WVM7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.22■□□□□ 0.83
STAG1Q8WVM7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
STAG1Q8WVM7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
STAG1Q8WVM7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
STAG1Q8WVM7 MRPL20P1-201ENST00000400819 433 ntBASIC20.22■□□□□ 0.83
STAG1Q8WVM7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.22■□□□□ 0.83
STAG1Q8WVM7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.22■□□□□ 0.83
STAG1Q8WVM7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.22■□□□□ 0.83
STAG1Q8WVM7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
STAG1Q8WVM7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
STAG1Q8WVM7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
STAG1Q8WVM7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
STAG1Q8WVM7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
STAG1Q8WVM7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
STAG1Q8WVM7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
STAG1Q8WVM7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
STAG1Q8WVM7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms