Protein–RNA interactions for Protein: Q8TDG2

ACTRT1, Actin-related protein T1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTRT1Q8TDG2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 AC009336.1-201ENST00000608941 1553 ntBASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 KRT18P38-201ENST00000449496 1282 ntBASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACTRT1Q8TDG2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 FAM220CP-201ENST00000395253 831 ntBASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 AC087499.1-201ENST00000418141 1075 ntBASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 RN7SL606P-201ENST00000472779 293 ntBASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.96■□□□□ 0.47
ACTRT1Q8TDG2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
ACTRT1Q8TDG2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.96■□□□□ 0.46
ACTRT1Q8TDG2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
ACTRT1Q8TDG2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.46
ACTRT1Q8TDG2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 AL391256.1-201ENST00000443260 1855 ntBASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 AC117947.1-201ENST00000427448 529 ntBASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 HOMER2P1-201ENST00000455653 964 ntBASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 GUSBP12-201ENST00000513727 720 ntBASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 AC005336.2-201ENST00000593183 939 ntBASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACTRT1Q8TDG2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms