Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.42■□□□□ 0.54
LMO3Q8TAP4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 AC107918.4-202ENST00000641623 219 ntBASIC18.41■□□□□ 0.54
LMO3Q8TAP4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 AC006504.4-201ENST00000592118 1568 ntBASIC18.41■□□□□ 0.54
LMO3Q8TAP4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LMO3Q8TAP4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 KRT18P27-201ENST00000427733 1299 ntBASIC18.4■□□□□ 0.54
LMO3Q8TAP4 HNRNPDP1-201ENST00000439535 754 ntBASIC18.4■□□□□ 0.54
LMO3Q8TAP4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMO3Q8TAP4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
LMO3Q8TAP4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LMO3Q8TAP4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
LMO3Q8TAP4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LMO3Q8TAP4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms