Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 CEND1P1-201ENST00000451006 455 ntBASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SLC38A9Q8NBW4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC38A9Q8NBW4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC38A9Q8NBW4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC38A9Q8NBW4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC38A9Q8NBW4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.19■□□□□ 0.18
SLC38A9Q8NBW4 PMS2P2-201ENST00000425039 1128 ntBASIC16.19■□□□□ 0.18
SLC38A9Q8NBW4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC38A9Q8NBW4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.19■□□□□ 0.18
SLC38A9Q8NBW4 AC134043.2-201ENST00000624206 2238 ntBASIC16.19■□□□□ 0.18
SLC38A9Q8NBW4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC38A9Q8NBW4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SLC38A9Q8NBW4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SLC38A9Q8NBW4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC38A9Q8NBW4 AC092919.2-201ENST00000623631 1645 ntBASIC16.19■□□□□ 0.18
SLC38A9Q8NBW4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SLC38A9Q8NBW4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC38A9Q8NBW4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC38A9Q8NBW4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC38A9Q8NBW4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC38A9Q8NBW4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC38A9Q8NBW4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 HTR7P1-202ENST00000624664 4411 ntBASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 AC018470.1-201ENST00000624790 3129 ntBASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 AL513480.1-201ENST00000451731 511 ntBASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 AC091812.2-201ENST00000619081 385 ntBASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC38A9Q8NBW4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms