Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
DNAAF3Q8N9W5 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
DNAAF3Q8N9W5 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.6■□□□□ 0.41
DNAAF3Q8N9W5 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.6■□□□□ 0.41
DNAAF3Q8N9W5 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DNAAF3Q8N9W5 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
DNAAF3Q8N9W5 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DNAAF3Q8N9W5 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DNAAF3Q8N9W5 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
DNAAF3Q8N9W5 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
DNAAF3Q8N9W5 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 LINC02012-201ENST00000608206 1725 ntBASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 AC003669.1-201ENST00000334569 611 ntBASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 NKILA-202ENST00000614771 2598 ntBASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNAAF3Q8N9W5 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
DNAAF3Q8N9W5 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
DNAAF3Q8N9W5 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DNAAF3Q8N9W5 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DNAAF3Q8N9W5 AC011676.5-201ENST00000624864 2660 ntBASIC17.58■□□□□ 0.41
DNAAF3Q8N9W5 AC009336.1-201ENST00000608941 1553 ntBASIC17.58■□□□□ 0.41
DNAAF3Q8N9W5 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
DNAAF3Q8N9W5 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DNAAF3Q8N9W5 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DNAAF3Q8N9W5 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
DNAAF3Q8N9W5 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DNAAF3Q8N9W5 KLF4P1-201ENST00000412782 1185 ntBASIC17.58■□□□□ 0.4
DNAAF3Q8N9W5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
DNAAF3Q8N9W5 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
DNAAF3Q8N9W5 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DNAAF3Q8N9W5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.58■□□□□ 0.4
DNAAF3Q8N9W5 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.58■□□□□ 0.4
DNAAF3Q8N9W5 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.58■□□□□ 0.4
DNAAF3Q8N9W5 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.58■□□□□ 0.4
DNAAF3Q8N9W5 BNIP3P18-201ENST00000593976 575 ntBASIC17.58■□□□□ 0.4
DNAAF3Q8N9W5 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.58■□□□□ 0.4
DNAAF3Q8N9W5 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DNAAF3Q8N9W5 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
DNAAF3Q8N9W5 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DNAAF3Q8N9W5 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
DNAAF3Q8N9W5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DNAAF3Q8N9W5 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DNAAF3Q8N9W5 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
DNAAF3Q8N9W5 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DNAAF3Q8N9W5 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.58■□□□□ 0.4
DNAAF3Q8N9W5 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNAAF3Q8N9W5 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNAAF3Q8N9W5 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNAAF3Q8N9W5 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNAAF3Q8N9W5 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
DNAAF3Q8N9W5 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
DNAAF3Q8N9W5 INTS4P1-201ENST00000438455 1935 ntBASIC17.57■□□□□ 0.4
DNAAF3Q8N9W5 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DNAAF3Q8N9W5 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.57■□□□□ 0.4
DNAAF3Q8N9W5 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.57■□□□□ 0.4
DNAAF3Q8N9W5 AC132938.5-201ENST00000624980 1813 ntBASIC17.57■□□□□ 0.4
DNAAF3Q8N9W5 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNAAF3Q8N9W5 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNAAF3Q8N9W5 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.57■□□□□ 0.4
DNAAF3Q8N9W5 RCN1P2-201ENST00000398357 915 ntBASIC17.57■□□□□ 0.4
DNAAF3Q8N9W5 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms