Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 PCDHB18P-201ENST00000524813 2368 ntBASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 AC093909.1-201ENST00000504731 1122 ntBASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 RNPS1P1-201ENST00000507437 918 ntBASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 OR7E14P-202ENST00000530490 1290 ntBASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 AC021087.4-201ENST00000563761 564 ntBASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 AL031008.1-201ENST00000619963 541 ntBASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB42Q8N4Z0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 LINC00982-205ENST00000420957 435 ntBASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 AC079781.3-201ENST00000449110 356 ntBASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 AC004817.3-201ENST00000602957 2129 ntBASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
RAB42Q8N4Z0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB42Q8N4Z0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB42Q8N4Z0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB42Q8N4Z0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.78■□□□□ 0.28
RAB42Q8N4Z0 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RAB42Q8N4Z0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
RAB42Q8N4Z0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB42Q8N4Z0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB42Q8N4Z0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB42Q8N4Z0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
RAB42Q8N4Z0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB42Q8N4Z0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.78■□□□□ 0.28
RAB42Q8N4Z0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB42Q8N4Z0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.78■□□□□ 0.28
RAB42Q8N4Z0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.78■□□□□ 0.28
RAB42Q8N4Z0 AP002469.2-201ENST00000531724 424 ntBASIC16.78■□□□□ 0.28
RAB42Q8N4Z0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB42Q8N4Z0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RAB42Q8N4Z0 AL773604.1-201ENST00000617417 272 ntBASIC16.78■□□□□ 0.28
RAB42Q8N4Z0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB42Q8N4Z0 PKD1P5-201ENST00000532415 10291 ntBASIC16.78■□□□□ 0.28
RAB42Q8N4Z0 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB42Q8N4Z0 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB42Q8N4Z0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB42Q8N4Z0 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB42Q8N4Z0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB42Q8N4Z0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms