Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.71■□□□□ 0.59
VPS52Q8N1B4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS52Q8N1B4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS52Q8N1B4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
VPS52Q8N1B4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
VPS52Q8N1B4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VPS52Q8N1B4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS52Q8N1B4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS52Q8N1B4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS52Q8N1B4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS52Q8N1B4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS52Q8N1B4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VPS52Q8N1B4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.71■□□□□ 0.59
VPS52Q8N1B4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.71■□□□□ 0.59
VPS52Q8N1B4 RPS15P9-201ENST00000494093 319 ntBASIC18.71■□□□□ 0.59
VPS52Q8N1B4 IGHV3-65-201ENST00000523210 341 ntBASIC18.71■□□□□ 0.59
VPS52Q8N1B4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS52Q8N1B4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.71■□□□□ 0.59
VPS52Q8N1B4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.71■□□□□ 0.59
VPS52Q8N1B4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS52Q8N1B4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.71■□□□□ 0.59
VPS52Q8N1B4 AC018845.2-201ENST00000568326 409 ntBASIC18.71■□□□□ 0.59
VPS52Q8N1B4 AC109462.3-201ENST00000573934 613 ntBASIC18.71■□□□□ 0.59
VPS52Q8N1B4 AC008667.4-201ENST00000607370 168 ntBASIC18.71■□□□□ 0.59
VPS52Q8N1B4 AC019129.2-201ENST00000609837 1235 ntBASIC18.71■□□□□ 0.59
VPS52Q8N1B4 AL596442.2-201ENST00000610240 980 ntBASIC18.71■□□□□ 0.59
VPS52Q8N1B4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VPS52Q8N1B4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS52Q8N1B4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS52Q8N1B4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS52Q8N1B4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS52Q8N1B4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS52Q8N1B4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
VPS52Q8N1B4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 AP006288.1-201ENST00000446065 395 ntBASIC18.7■□□□□ 0.58
VPS52Q8N1B4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 AC004790.2-201ENST00000623588 572 ntBASIC18.7■□□□□ 0.58
VPS52Q8N1B4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS52Q8N1B4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 PRSS29P-201ENST00000440800 595 ntBASIC18.69■□□□□ 0.58
VPS52Q8N1B4 HCG4B-203ENST00000450128 991 ntBASIC18.69■□□□□ 0.58
VPS52Q8N1B4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms