Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TMEFF1Q8IYR6 AL354751.1-201ENST00000412768 1863 ntBASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 AL592309.1-201ENST00000443127 649 ntBASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 AC067863.1-201ENST00000494933 530 ntBASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 RNA5SP421-201ENST00000516864 134 ntBASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 FAM86C2P-203ENST00000528684 1004 ntBASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 AC099522.2-201ENST00000607001 744 ntBASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEFF1Q8IYR6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEFF1Q8IYR6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TMEFF1Q8IYR6 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms