Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 AC068472.1-201ENST00000474589 881 ntBASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 AC026691.1-201ENST00000602502 2017 ntBASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NUDCD3Q8IVD9 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 TSPY15P-201ENST00000457163 923 ntBASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NUDCD3Q8IVD9 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 HLA-F-220ENST00000434407 884 ntBASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms