Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM50Q86XT4 ACTL9-202ENST00000612068 1252 ntBASIC19.19■□□□□ 0.66
TRIM50Q86XT4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM50Q86XT4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TRIM50Q86XT4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM50Q86XT4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM50Q86XT4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM50Q86XT4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM50Q86XT4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM50Q86XT4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM50Q86XT4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM50Q86XT4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.18■□□□□ 0.66
TRIM50Q86XT4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM50Q86XT4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM50Q86XT4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM50Q86XT4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM50Q86XT4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
TRIM50Q86XT4 PMS2P2-201ENST00000425039 1128 ntBASIC19.18■□□□□ 0.66
TRIM50Q86XT4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM50Q86XT4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.18■□□□□ 0.66
TRIM50Q86XT4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.18■□□□□ 0.66
TRIM50Q86XT4 AL031432.2-201ENST00000566714 459 ntBASIC19.18■□□□□ 0.66
TRIM50Q86XT4 AL928711.1-201ENST00000570165 459 ntBASIC19.18■□□□□ 0.66
TRIM50Q86XT4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.18■□□□□ 0.66
TRIM50Q86XT4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM50Q86XT4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM50Q86XT4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM50Q86XT4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM50Q86XT4 AC008764.6-201ENST00000595909 2069 ntBASIC19.18■□□□□ 0.66
TRIM50Q86XT4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM50Q86XT4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM50Q86XT4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM50Q86XT4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TRIM50Q86XT4 ELL2P1-201ENST00000413990 1906 ntBASIC19.17■□□□□ 0.66
TRIM50Q86XT4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TRIM50Q86XT4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
TRIM50Q86XT4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TRIM50Q86XT4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TRIM50Q86XT4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM50Q86XT4 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.17■□□□□ 0.66
TRIM50Q86XT4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
TRIM50Q86XT4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM50Q86XT4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM50Q86XT4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.17■□□□□ 0.66
TRIM50Q86XT4 FAM58CP-201ENST00000435741 640 ntBASIC19.17■□□□□ 0.66
TRIM50Q86XT4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM50Q86XT4 AC023141.13-201ENST00000604991 943 ntBASIC19.17■□□□□ 0.66
TRIM50Q86XT4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM50Q86XT4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.17■□□□□ 0.66
TRIM50Q86XT4 AC092919.2-201ENST00000623631 1645 ntBASIC19.17■□□□□ 0.66
TRIM50Q86XT4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TRIM50Q86XT4 PKD1P1-201ENST00000458669 6805 ntBASIC19.17■□□□□ 0.66
TRIM50Q86XT4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TRIM50Q86XT4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM50Q86XT4 AC133963.1-201ENST00000504166 1679 ntBASIC19.17■□□□□ 0.66
TRIM50Q86XT4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM50Q86XT4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM50Q86XT4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM50Q86XT4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM50Q86XT4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM50Q86XT4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM50Q86XT4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM50Q86XT4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.16■□□□□ 0.66
TRIM50Q86XT4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TRIM50Q86XT4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TRIM50Q86XT4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM50Q86XT4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM50Q86XT4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM50Q86XT4 FAM185BP-201ENST00000443595 716 ntBASIC19.16■□□□□ 0.66
TRIM50Q86XT4 CEND1P1-201ENST00000451006 455 ntBASIC19.16■□□□□ 0.66
TRIM50Q86XT4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.16■□□□□ 0.66
TRIM50Q86XT4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM50Q86XT4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.16■□□□□ 0.66
TRIM50Q86XT4 AC091812.2-201ENST00000619081 385 ntBASIC19.16■□□□□ 0.66
TRIM50Q86XT4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TRIM50Q86XT4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM50Q86XT4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.16■□□□□ 0.66
TRIM50Q86XT4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM50Q86XT4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM50Q86XT4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM50Q86XT4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TRIM50Q86XT4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM50Q86XT4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TRIM50Q86XT4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM50Q86XT4 NOC2LP1-202ENST00000452600 2235 ntBASIC19.16■□□□□ 0.66
TRIM50Q86XT4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TRIM50Q86XT4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 AC018470.1-201ENST00000624790 3129 ntBASIC19.15■□□□□ 0.66
TRIM50Q86XT4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms