Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 IGHV3-52-201ENST00000519770 353 ntBASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 AC109462.3-201ENST00000573934 613 ntBASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRRTM1Q86UE6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
LRRTM1Q86UE6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRRTM1Q86UE6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRRTM1Q86UE6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15□□□□□ -0.01
LRRTM1Q86UE6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRRTM1Q86UE6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15□□□□□ -0.01
LRRTM1Q86UE6 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRRTM1Q86UE6 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15□□□□□ -0.01
LRRTM1Q86UE6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15□□□□□ -0.01
LRRTM1Q86UE6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRRTM1Q86UE6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15□□□□□ -0.01
LRRTM1Q86UE6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRRTM1Q86UE6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRRTM1Q86UE6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15□□□□□ -0.01
LRRTM1Q86UE6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15□□□□□ -0.01
LRRTM1Q86UE6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
LRRTM1Q86UE6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15□□□□□ -0.01
LRRTM1Q86UE6 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LRRTM1Q86UE6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
LRRTM1Q86UE6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRRTM1Q86UE6 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
LRRTM1Q86UE6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
LRRTM1Q86UE6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRRTM1Q86UE6 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
LRRTM1Q86UE6 PKD1P5-201ENST00000532415 10291 ntBASIC15□□□□□ -0.01
LRRTM1Q86UE6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRRTM1Q86UE6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LRRTM1Q86UE6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15□□□□□ -0.01
LRRTM1Q86UE6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 AL662844.4-201ENST00000606367 2838 ntBASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 GPR32P1-201ENST00000601788 811 ntBASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 AL513523.2-202ENST00000427283 2040 ntBASIC14.99□□□□□ -0.01
LRRTM1Q86UE6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 LINC01568-207ENST00000641790 1380 ntBASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms