Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC11.48□□□□□ -0.57
SCXQ7RTU7 SDHAP2-201ENST00000455183 2001 ntBASIC11.48□□□□□ -0.57
SCXQ7RTU7 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
SCXQ7RTU7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
SCXQ7RTU7 AC012317.2-201ENST00000623305 2251 ntBASIC11.48□□□□□ -0.57
SCXQ7RTU7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC11.48□□□□□ -0.57
SCXQ7RTU7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SCXQ7RTU7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SCXQ7RTU7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SCXQ7RTU7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SCXQ7RTU7 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
SCXQ7RTU7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SCXQ7RTU7 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SCXQ7RTU7 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SCXQ7RTU7 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC11.47□□□□□ -0.57
SCXQ7RTU7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC11.47□□□□□ -0.57
SCXQ7RTU7 AL499627.1-201ENST00000569373 2188 ntBASIC11.47□□□□□ -0.57
SCXQ7RTU7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 GNAS-203ENST00000306120 1878 ntBASIC11.47□□□□□ -0.57
SCXQ7RTU7 AL024508.2-201ENST00000607749 1894 ntBASIC11.47□□□□□ -0.57
SCXQ7RTU7 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC11.47□□□□□ -0.57
SCXQ7RTU7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC11.47□□□□□ -0.57
SCXQ7RTU7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC11.47□□□□□ -0.57
SCXQ7RTU7 NORAD-201ENST00000565493 5339 ntBASIC11.47□□□□□ -0.57
SCXQ7RTU7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
SCXQ7RTU7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC11.47□□□□□ -0.57
SCXQ7RTU7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
SCXQ7RTU7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC11.47□□□□□ -0.57
SCXQ7RTU7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC11.47□□□□□ -0.57
SCXQ7RTU7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
SCXQ7RTU7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC11.47□□□□□ -0.57
SCXQ7RTU7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC11.47□□□□□ -0.57
SCXQ7RTU7 PENK-208ENST00000523051 772 ntTSL 5 BASIC11.47□□□□□ -0.57
SCXQ7RTU7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC11.47□□□□□ -0.57
SCXQ7RTU7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC11.47□□□□□ -0.57
SCXQ7RTU7 AL591684.3-201ENST00000605187 298 ntBASIC11.47□□□□□ -0.57
SCXQ7RTU7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
SCXQ7RTU7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC11.47□□□□□ -0.57
SCXQ7RTU7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC11.47□□□□□ -0.57
SCXQ7RTU7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
SCXQ7RTU7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
SCXQ7RTU7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
SCXQ7RTU7 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
SCXQ7RTU7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC11.47□□□□□ -0.57
SCXQ7RTU7 HYMAI-201ENST00000635591 3347 ntBASIC11.47□□□□□ -0.57
SCXQ7RTU7 MIR600HG-201ENST00000449175 5984 ntBASIC11.47□□□□□ -0.57
SCXQ7RTU7 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SCXQ7RTU7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SCXQ7RTU7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
SCXQ7RTU7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SCXQ7RTU7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC11.46□□□□□ -0.57
SCXQ7RTU7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
SCXQ7RTU7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SCXQ7RTU7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SCXQ7RTU7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SCXQ7RTU7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
SCXQ7RTU7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SCXQ7RTU7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC11.46□□□□□ -0.57
SCXQ7RTU7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC11.46□□□□□ -0.57
SCXQ7RTU7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SCXQ7RTU7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC11.46□□□□□ -0.57
SCXQ7RTU7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SCXQ7RTU7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC11.46□□□□□ -0.57
SCXQ7RTU7 AD000864.1-201ENST00000624076 2295 ntBASIC11.46□□□□□ -0.57
SCXQ7RTU7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms