Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 AC067852.2-201ENST00000590513 2313 ntBASIC21.64■■□□□ 1.05
COPS6Q7L5N1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COPS6Q7L5N1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
COPS6Q7L5N1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COPS6Q7L5N1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COPS6Q7L5N1 GNAS-203ENST00000306120 1878 ntBASIC21.64■■□□□ 1.05
COPS6Q7L5N1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
COPS6Q7L5N1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC21.64■■□□□ 1.05
COPS6Q7L5N1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC21.64■■□□□ 1.05
COPS6Q7L5N1 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC21.64■■□□□ 1.05
COPS6Q7L5N1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
COPS6Q7L5N1 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COPS6Q7L5N1 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC21.63■■□□□ 1.05
COPS6Q7L5N1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
COPS6Q7L5N1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COPS6Q7L5N1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COPS6Q7L5N1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC21.63■■□□□ 1.05
COPS6Q7L5N1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
COPS6Q7L5N1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COPS6Q7L5N1 AL138688.1-201ENST00000624851 1594 ntBASIC21.63■■□□□ 1.05
COPS6Q7L5N1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COPS6Q7L5N1 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
COPS6Q7L5N1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COPS6Q7L5N1 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC21.63■■□□□ 1.05
COPS6Q7L5N1 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC21.63■■□□□ 1.05
COPS6Q7L5N1 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COPS6Q7L5N1 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC21.63■■□□□ 1.05
COPS6Q7L5N1 AL513210.1-201ENST00000629608 234 ntBASIC21.63■■□□□ 1.05
COPS6Q7L5N1 AL645728.2-201ENST00000641974 660 ntBASIC21.63■■□□□ 1.05
COPS6Q7L5N1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.63■■□□□ 1.05
COPS6Q7L5N1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.63■■□□□ 1.05
COPS6Q7L5N1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
COPS6Q7L5N1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
COPS6Q7L5N1 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COPS6Q7L5N1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC21.63■■□□□ 1.05
COPS6Q7L5N1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC21.63■■□□□ 1.05
COPS6Q7L5N1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
COPS6Q7L5N1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 AC004461.1-201ENST00000412461 403 ntBASIC21.62■■□□□ 1.05
COPS6Q7L5N1 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 IGHV3OR16-6-201ENST00000568775 360 ntBASIC21.62■■□□□ 1.05
COPS6Q7L5N1 MIR4515-201ENST00000584082 81 ntBASIC21.62■■□□□ 1.05
COPS6Q7L5N1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 AL355385.1-201ENST00000606123 409 ntBASIC21.62■■□□□ 1.05
COPS6Q7L5N1 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 NOC2LP2-201ENST00000407594 1944 ntBASIC21.62■■□□□ 1.05
COPS6Q7L5N1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 AC068880.1-201ENST00000507289 2297 ntBASIC21.62■■□□□ 1.05
COPS6Q7L5N1 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COPS6Q7L5N1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 AL133373.2-201ENST00000623187 2828 ntBASIC21.61■■□□□ 1.05
COPS6Q7L5N1 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 AC140658.5-201ENST00000438532 169 ntBASIC21.61■■□□□ 1.05
COPS6Q7L5N1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 AP000344.2-201ENST00000512987 629 ntBASIC21.61■■□□□ 1.05
COPS6Q7L5N1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 AC112191.1-201ENST00000523689 701 ntBASIC21.61■■□□□ 1.05
COPS6Q7L5N1 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 BSG-214ENST00000614867 960 ntTSL 3 BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms