Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 AC117947.1-201ENST00000427448 529 ntBASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 AL139327.4-201ENST00000612362 153 ntBASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 AC073912.3-201ENST00000624414 853 ntBASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 BX664615.1-201ENST00000443558 458 ntBASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 AC009154.2-201ENST00000621177 724 ntBASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 LINC02199-201ENST00000506655 2702 ntBASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.9■□□□□ 0.14
PTCHD4Q6ZW05 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
PTCHD4Q6ZW05 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms