Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
CCDC149Q6ZUS6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC149Q6ZUS6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC149Q6ZUS6 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC149Q6ZUS6 AC002056.1-201ENST00000395613 760 ntBASIC18.05■□□□□ 0.48
CCDC149Q6ZUS6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC149Q6ZUS6 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC149Q6ZUS6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
CCDC149Q6ZUS6 AC005498.2-205ENST00000593218 784 ntBASIC18.05■□□□□ 0.48
CCDC149Q6ZUS6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC149Q6ZUS6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC149Q6ZUS6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC149Q6ZUS6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC149Q6ZUS6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCDC149Q6ZUS6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC149Q6ZUS6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC149Q6ZUS6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC149Q6ZUS6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 MIR4745-201ENST00000577608 62 ntBASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 AL645728.2-201ENST00000641974 660 ntBASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC149Q6ZUS6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 LINC00304-203ENST00000565008 1864 ntBASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 BICD1-207ENST00000551848 1962 ntBASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 AC092919.2-201ENST00000623631 1645 ntBASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 TIMM8BP1-201ENST00000452384 211 ntBASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 AC067863.1-201ENST00000494933 530 ntBASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC149Q6ZUS6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC149Q6ZUS6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC149Q6ZUS6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC149Q6ZUS6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC149Q6ZUS6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC149Q6ZUS6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC149Q6ZUS6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
CCDC149Q6ZUS6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CCDC149Q6ZUS6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC149Q6ZUS6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC149Q6ZUS6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC149Q6ZUS6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC149Q6ZUS6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC149Q6ZUS6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC149Q6ZUS6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CCDC149Q6ZUS6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC149Q6ZUS6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.02■□□□□ 0.48
CCDC149Q6ZUS6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CCDC149Q6ZUS6 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms