Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 SIGLEC30P-201ENST00000455569 941 ntBASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 AC092910.1-201ENST00000482027 1129 ntBASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 SLC25A1P1-201ENST00000528351 927 ntBASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 AC008735.5-201ENST00000623544 497 ntBASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 AP002414.3-201ENST00000589352 1468 ntBASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RFWD3Q6PCD5 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18■□□□□ 0.47
RFWD3Q6PCD5 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFWD3Q6PCD5 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18■□□□□ 0.47
RFWD3Q6PCD5 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18■□□□□ 0.47
RFWD3Q6PCD5 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18■□□□□ 0.47
RFWD3Q6PCD5 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18■□□□□ 0.47
RFWD3Q6PCD5 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFWD3Q6PCD5 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18■□□□□ 0.47
RFWD3Q6PCD5 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFWD3Q6PCD5 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RFWD3Q6PCD5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFWD3Q6PCD5 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RFWD3Q6PCD5 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFWD3Q6PCD5 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFWD3Q6PCD5 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18■□□□□ 0.47
RFWD3Q6PCD5 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18■□□□□ 0.47
RFWD3Q6PCD5 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18■□□□□ 0.47
RFWD3Q6PCD5 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18■□□□□ 0.47
RFWD3Q6PCD5 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18■□□□□ 0.47
RFWD3Q6PCD5 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18■□□□□ 0.47
RFWD3Q6PCD5 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18■□□□□ 0.47
RFWD3Q6PCD5 LINC01451-201ENST00000623792 534 ntBASIC18■□□□□ 0.47
RFWD3Q6PCD5 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18■□□□□ 0.47
RFWD3Q6PCD5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18■□□□□ 0.47
RFWD3Q6PCD5 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RFWD3Q6PCD5 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
RFWD3Q6PCD5 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18■□□□□ 0.47
RFWD3Q6PCD5 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18■□□□□ 0.47
RFWD3Q6PCD5 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFWD3Q6PCD5 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFWD3Q6PCD5 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 LAGE3P1-201ENST00000425356 484 ntBASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD3Q6PCD5 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 AC046158.3-201ENST00000624947 2558 ntBASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFWD3Q6PCD5 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms