Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.39■□□□□ 0.53
CNKSR3Q6P9H4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CNKSR3Q6P9H4 CRB3P1-201ENST00000449338 276 ntBASIC18.39■□□□□ 0.53
CNKSR3Q6P9H4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNKSR3Q6P9H4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNKSR3Q6P9H4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNKSR3Q6P9H4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CNKSR3Q6P9H4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.39■□□□□ 0.53
CNKSR3Q6P9H4 MIR3909-201ENST00000579518 119 ntBASIC18.39■□□□□ 0.53
CNKSR3Q6P9H4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CNKSR3Q6P9H4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.39■□□□□ 0.53
CNKSR3Q6P9H4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNKSR3Q6P9H4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.39■□□□□ 0.53
CNKSR3Q6P9H4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.39■□□□□ 0.53
CNKSR3Q6P9H4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNKSR3Q6P9H4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNKSR3Q6P9H4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNKSR3Q6P9H4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CNKSR3Q6P9H4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNKSR3Q6P9H4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNKSR3Q6P9H4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CNKSR3Q6P9H4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNKSR3Q6P9H4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.38■□□□□ 0.53
CNKSR3Q6P9H4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNKSR3Q6P9H4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
CNKSR3Q6P9H4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNKSR3Q6P9H4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.38■□□□□ 0.53
CNKSR3Q6P9H4 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.38■□□□□ 0.53
CNKSR3Q6P9H4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.38■□□□□ 0.53
CNKSR3Q6P9H4 AC241585.1-201ENST00000433527 519 ntBASIC18.38■□□□□ 0.53
CNKSR3Q6P9H4 AP005018.1-201ENST00000525475 301 ntBASIC18.38■□□□□ 0.53
CNKSR3Q6P9H4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.38■□□□□ 0.53
CNKSR3Q6P9H4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.38■□□□□ 0.53
CNKSR3Q6P9H4 AL358472.5-202ENST00000641448 1267 ntBASIC18.38■□□□□ 0.53
CNKSR3Q6P9H4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.38■□□□□ 0.53
CNKSR3Q6P9H4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNKSR3Q6P9H4 BX323043.1-201ENST00000641006 1765 ntBASIC18.37■□□□□ 0.53
CNKSR3Q6P9H4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
CNKSR3Q6P9H4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CNKSR3Q6P9H4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNKSR3Q6P9H4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNKSR3Q6P9H4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
CNKSR3Q6P9H4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNKSR3Q6P9H4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNKSR3Q6P9H4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.37■□□□□ 0.53
CNKSR3Q6P9H4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CNKSR3Q6P9H4 AC027307.3-201ENST00000594262 1100 ntBASIC18.37■□□□□ 0.53
CNKSR3Q6P9H4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.37■□□□□ 0.53
CNKSR3Q6P9H4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.37■□□□□ 0.53
CNKSR3Q6P9H4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.37■□□□□ 0.53
CNKSR3Q6P9H4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.37■□□□□ 0.53
CNKSR3Q6P9H4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.37■□□□□ 0.53
CNKSR3Q6P9H4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNKSR3Q6P9H4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CNKSR3Q6P9H4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNKSR3Q6P9H4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CNKSR3Q6P9H4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CNKSR3Q6P9H4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNKSR3Q6P9H4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CNKSR3Q6P9H4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNKSR3Q6P9H4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
CNKSR3Q6P9H4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNKSR3Q6P9H4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CNKSR3Q6P9H4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.36■□□□□ 0.53
CNKSR3Q6P9H4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNKSR3Q6P9H4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CNKSR3Q6P9H4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNKSR3Q6P9H4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.36■□□□□ 0.53
CNKSR3Q6P9H4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
CNKSR3Q6P9H4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CNKSR3Q6P9H4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.36■□□□□ 0.53
CNKSR3Q6P9H4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.36■□□□□ 0.53
CNKSR3Q6P9H4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNKSR3Q6P9H4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.36■□□□□ 0.53
CNKSR3Q6P9H4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.36■□□□□ 0.53
CNKSR3Q6P9H4 AC004890.2-204ENST00000481968 304 ntBASIC18.36■□□□□ 0.53
CNKSR3Q6P9H4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.36■□□□□ 0.53
CNKSR3Q6P9H4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.36■□□□□ 0.53
CNKSR3Q6P9H4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNKSR3Q6P9H4 AC091167.2-201ENST00000579581 588 ntBASIC18.36■□□□□ 0.53
CNKSR3Q6P9H4 MIR4453-201ENST00000584019 89 ntBASIC18.36■□□□□ 0.53
CNKSR3Q6P9H4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.36■□□□□ 0.53
CNKSR3Q6P9H4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.36■□□□□ 0.53
CNKSR3Q6P9H4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNKSR3Q6P9H4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNKSR3Q6P9H4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.35■□□□□ 0.53
CNKSR3Q6P9H4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CNKSR3Q6P9H4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CNKSR3Q6P9H4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.35■□□□□ 0.53
CNKSR3Q6P9H4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.35■□□□□ 0.53
CNKSR3Q6P9H4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNKSR3Q6P9H4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.35■□□□□ 0.53
CNKSR3Q6P9H4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.35■□□□□ 0.53
CNKSR3Q6P9H4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.35■□□□□ 0.53
CNKSR3Q6P9H4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNKSR3Q6P9H4 HLA-J-202ENST00000469281 1241 ntBASIC18.35■□□□□ 0.53
CNKSR3Q6P9H4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNKSR3Q6P9H4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.35■□□□□ 0.53
CNKSR3Q6P9H4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.35■□□□□ 0.53
CNKSR3Q6P9H4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms