Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 AC116353.5-201ENST00000638148 1699 ntBASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 AC005915.1-201ENST00000624912 2018 ntBASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 AC126755.1-201ENST00000525846 6405 ntBASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 STARP1-201ENST00000397973 869 ntBASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.57■□□□□ 0.24
PPP4R4Q6NUP7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 KRT8P7-201ENST00000533003 1432 ntBASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 AC022898.2-201ENST00000616822 1312 ntBASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 VENTXP5-201ENST00000523979 775 ntBASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 MIR3917-201ENST00000580971 93 ntBASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 AC006449.5-201ENST00000610658 2098 ntBASIC16.56■□□□□ 0.24
PPP4R4Q6NUP7 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms