Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.67■□□□□ 0.74
ATL3Q6DD88 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATL3Q6DD88 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATL3Q6DD88 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATL3Q6DD88 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ATL3Q6DD88 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.67■□□□□ 0.74
ATL3Q6DD88 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATL3Q6DD88 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.67■□□□□ 0.74
ATL3Q6DD88 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.67■□□□□ 0.74
ATL3Q6DD88 AL020989.1-201ENST00000422979 469 ntBASIC19.67■□□□□ 0.74
ATL3Q6DD88 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ATL3Q6DD88 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.67■□□□□ 0.74
ATL3Q6DD88 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
ATL3Q6DD88 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.67■□□□□ 0.74
ATL3Q6DD88 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.67■□□□□ 0.74
ATL3Q6DD88 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.67■□□□□ 0.74
ATL3Q6DD88 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATL3Q6DD88 AP000867.4-201ENST00000641616 219 ntBASIC19.67■□□□□ 0.74
ATL3Q6DD88 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATL3Q6DD88 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATL3Q6DD88 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATL3Q6DD88 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.67■□□□□ 0.74
ATL3Q6DD88 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATL3Q6DD88 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ATL3Q6DD88 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ATL3Q6DD88 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATL3Q6DD88 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.67■□□□□ 0.74
ATL3Q6DD88 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATL3Q6DD88 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATL3Q6DD88 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
ATL3Q6DD88 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
ATL3Q6DD88 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
ATL3Q6DD88 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATL3Q6DD88 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.66■□□□□ 0.74
ATL3Q6DD88 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATL3Q6DD88 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.66■□□□□ 0.74
ATL3Q6DD88 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.66■□□□□ 0.74
ATL3Q6DD88 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATL3Q6DD88 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.66■□□□□ 0.74
ATL3Q6DD88 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
ATL3Q6DD88 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATL3Q6DD88 TSSC2-201ENST00000450217 709 ntBASIC19.66■□□□□ 0.74
ATL3Q6DD88 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
ATL3Q6DD88 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATL3Q6DD88 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.66■□□□□ 0.74
ATL3Q6DD88 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
ATL3Q6DD88 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.66■□□□□ 0.74
ATL3Q6DD88 KRT18P1-202ENST00000452408 1331 ntBASIC19.66■□□□□ 0.74
ATL3Q6DD88 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATL3Q6DD88 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATL3Q6DD88 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATL3Q6DD88 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATL3Q6DD88 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATL3Q6DD88 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
ATL3Q6DD88 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
ATL3Q6DD88 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
ATL3Q6DD88 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATL3Q6DD88 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATL3Q6DD88 PCDHB17P-201ENST00000539533 2393 ntBASIC19.65■□□□□ 0.74
ATL3Q6DD88 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATL3Q6DD88 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.65■□□□□ 0.74
ATL3Q6DD88 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATL3Q6DD88 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATL3Q6DD88 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
ATL3Q6DD88 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ATL3Q6DD88 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.65■□□□□ 0.74
ATL3Q6DD88 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATL3Q6DD88 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ATL3Q6DD88 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
ATL3Q6DD88 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATL3Q6DD88 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ATL3Q6DD88 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATL3Q6DD88 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATL3Q6DD88 POM121L3P-201ENST00000419331 1163 ntBASIC19.65■□□□□ 0.74
ATL3Q6DD88 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.65■□□□□ 0.74
ATL3Q6DD88 KRT17P6-201ENST00000453795 1220 ntBASIC19.65■□□□□ 0.74
ATL3Q6DD88 TPSP2-201ENST00000561760 610 ntBASIC19.65■□□□□ 0.74
ATL3Q6DD88 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATL3Q6DD88 BNIP3P18-201ENST00000593976 575 ntBASIC19.65■□□□□ 0.74
ATL3Q6DD88 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATL3Q6DD88 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
ATL3Q6DD88 SIGLEC16-201ENST00000599858 1437 ntBASIC19.65■□□□□ 0.74
ATL3Q6DD88 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATL3Q6DD88 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
ATL3Q6DD88 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ATL3Q6DD88 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATL3Q6DD88 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ATL3Q6DD88 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.65■□□□□ 0.74
ATL3Q6DD88 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATL3Q6DD88 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ATL3Q6DD88 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
ATL3Q6DD88 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATL3Q6DD88 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
ATL3Q6DD88 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ATL3Q6DD88 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ATL3Q6DD88 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ATL3Q6DD88 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.64■□□□□ 0.74
ATL3Q6DD88 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
ATL3Q6DD88 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.64■□□□□ 0.74
ATL3Q6DD88 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms