Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
GABREP78334 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
GABREP78334 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.35■□□□□ 0.21
GABREP78334 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GABREP78334 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GABREP78334 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.35■□□□□ 0.21
GABREP78334 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GABREP78334 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
GABREP78334 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
GABREP78334 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GABREP78334 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.35■□□□□ 0.21
GABREP78334 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GABREP78334 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GABREP78334 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GABREP78334 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GABREP78334 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GABREP78334 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GABREP78334 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.35■□□□□ 0.21
GABREP78334 AC005034.1-201ENST00000426657 489 ntBASIC16.35■□□□□ 0.21
GABREP78334 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.35■□□□□ 0.21
GABREP78334 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.35■□□□□ 0.21
GABREP78334 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
GABREP78334 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GABREP78334 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.35■□□□□ 0.21
GABREP78334 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.35■□□□□ 0.21
GABREP78334 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.35■□□□□ 0.21
GABREP78334 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.35■□□□□ 0.21
GABREP78334 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.35■□□□□ 0.21
GABREP78334 AF228730.6-201ENST00000641497 218 ntBASIC16.35■□□□□ 0.21
GABREP78334 AC084121.3-201ENST00000641716 218 ntBASIC16.35■□□□□ 0.21
GABREP78334 AC105233.6-201ENST00000642093 218 ntBASIC16.35■□□□□ 0.21
GABREP78334 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GABREP78334 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
GABREP78334 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.35■□□□□ 0.21
GABREP78334 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
GABREP78334 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.35■□□□□ 0.21
GABREP78334 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GABREP78334 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.35■□□□□ 0.21
GABREP78334 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
GABREP78334 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.35■□□□□ 0.21
GABREP78334 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GABREP78334 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GABREP78334 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.35■□□□□ 0.21
GABREP78334 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.35■□□□□ 0.21
GABREP78334 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GABREP78334 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GABREP78334 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GABREP78334 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GABREP78334 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
GABREP78334 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GABREP78334 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GABREP78334 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GABREP78334 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
GABREP78334 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
GABREP78334 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
GABREP78334 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.34■□□□□ 0.21
GABREP78334 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GABREP78334 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GABREP78334 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
GABREP78334 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GABREP78334 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GABREP78334 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GABREP78334 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
GABREP78334 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.34■□□□□ 0.21
GABREP78334 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
GABREP78334 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GABREP78334 BASP1P1-201ENST00000430708 665 ntBASIC16.34■□□□□ 0.21
GABREP78334 AL592309.1-201ENST00000443127 649 ntBASIC16.34■□□□□ 0.21
GABREP78334 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.34■□□□□ 0.21
GABREP78334 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.34■□□□□ 0.21
GABREP78334 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GABREP78334 KRT8P48-201ENST00000515599 1220 ntBASIC16.34■□□□□ 0.21
GABREP78334 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.34■□□□□ 0.21
GABREP78334 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.34■□□□□ 0.21
GABREP78334 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.34■□□□□ 0.21
GABREP78334 AL035252.4-201ENST00000624174 288 ntBASIC16.34■□□□□ 0.21
GABREP78334 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GABREP78334 AC007613.1-201ENST00000572811 2597 ntBASIC16.34■□□□□ 0.21
GABREP78334 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
GABREP78334 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
GABREP78334 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
GABREP78334 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.34■□□□□ 0.21
GABREP78334 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GABREP78334 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.34■□□□□ 0.21
GABREP78334 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.34■□□□□ 0.21
GABREP78334 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
GABREP78334 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GABREP78334 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.34■□□□□ 0.21
GABREP78334 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.34■□□□□ 0.21
GABREP78334 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GABREP78334 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GABREP78334 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
GABREP78334 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
GABREP78334 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
GABREP78334 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
GABREP78334 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.33■□□□□ 0.21
GABREP78334 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
GABREP78334 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
GABREP78334 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GABREP78334 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms