Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CLTCL1P53675 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CLTCL1P53675 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CLTCL1P53675 UXT-AS1-201ENST00000590504 1525 ntBASIC24.38■■□□□ 1.49
CLTCL1P53675 GATB-213ENST00000515812 1893 ntTSL 5 BASIC24.38■■□□□ 1.49
CLTCL1P53675 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC24.38■■□□□ 1.49
CLTCL1P53675 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
CLTCL1P53675 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
CLTCL1P53675 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC24.38■■□□□ 1.49
CLTCL1P53675 TUBB3P1-201ENST00000405796 1332 ntBASIC24.38■■□□□ 1.49
CLTCL1P53675 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CLTCL1P53675 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC24.38■■□□□ 1.49
CLTCL1P53675 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CLTCL1P53675 AC107890.1-201ENST00000422478 521 ntBASIC24.38■■□□□ 1.49
CLTCL1P53675 KRT8P23-201ENST00000560090 1207 ntBASIC24.38■■□□□ 1.49
CLTCL1P53675 MIR4492-201ENST00000581627 80 ntBASIC24.38■■□□□ 1.49
CLTCL1P53675 CYP2A7P1-201ENST00000595391 815 ntBASIC24.38■■□□□ 1.49
CLTCL1P53675 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CLTCL1P53675 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC24.38■■□□□ 1.49
CLTCL1P53675 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
CLTCL1P53675 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
CLTCL1P53675 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CLTCL1P53675 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CLTCL1P53675 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CLTCL1P53675 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CLTCL1P53675 AC016396.2-201ENST00000562575 1417 ntBASIC24.37■■□□□ 1.49
CLTCL1P53675 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CLTCL1P53675 FO538757.1-201ENST00000623083 1397 ntBASIC24.37■■□□□ 1.49
CLTCL1P53675 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
CLTCL1P53675 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC24.37■■□□□ 1.49
CLTCL1P53675 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CLTCL1P53675 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CLTCL1P53675 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
CLTCL1P53675 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CLTCL1P53675 AC142381.1-201ENST00000426099 345 ntBASIC24.37■■□□□ 1.49
CLTCL1P53675 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CLTCL1P53675 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC24.37■■□□□ 1.49
CLTCL1P53675 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CLTCL1P53675 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC24.37■■□□□ 1.49
CLTCL1P53675 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CLTCL1P53675 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC24.37■■□□□ 1.49
CLTCL1P53675 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CLTCL1P53675 AL390754.1-201ENST00000619088 582 ntBASIC24.37■■□□□ 1.49
CLTCL1P53675 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CLTCL1P53675 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
CLTCL1P53675 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC24.37■■□□□ 1.49
CLTCL1P53675 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CLTCL1P53675 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CLTCL1P53675 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CLTCL1P53675 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CLTCL1P53675 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
CLTCL1P53675 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC24.36■■□□□ 1.49
CLTCL1P53675 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CLTCL1P53675 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CLTCL1P53675 ALG1L8P-201ENST00000533887 760 ntBASIC24.36■■□□□ 1.49
CLTCL1P53675 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CLTCL1P53675 YTHDF3-AS1-201ENST00000603538 718 ntBASIC24.36■■□□□ 1.49
CLTCL1P53675 AL158211.3-201ENST00000607385 239 ntBASIC24.36■■□□□ 1.49
CLTCL1P53675 AC008267.7-201ENST00000624570 1194 ntBASIC24.36■■□□□ 1.49
CLTCL1P53675 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC24.36■■□□□ 1.49
CLTCL1P53675 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
CLTCL1P53675 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CLTCL1P53675 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC24.36■■□□□ 1.49
CLTCL1P53675 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CLTCL1P53675 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC24.36■■□□□ 1.49
CLTCL1P53675 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC24.35■■□□□ 1.49
CLTCL1P53675 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC24.35■■□□□ 1.49
CLTCL1P53675 DUT-210ENST00000559935 569 ntTSL 3 BASIC24.35■■□□□ 1.49
CLTCL1P53675 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC24.35■■□□□ 1.49
CLTCL1P53675 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CLTCL1P53675 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CLTCL1P53675 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CLTCL1P53675 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CLTCL1P53675 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC24.35■■□□□ 1.49
CLTCL1P53675 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CLTCL1P53675 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CLTCL1P53675 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CLTCL1P53675 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC24.35■■□□□ 1.49
CLTCL1P53675 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC24.35■■□□□ 1.49
CLTCL1P53675 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
CLTCL1P53675 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC24.35■■□□□ 1.49
CLTCL1P53675 SLC25A39P2-201ENST00000537614 270 ntBASIC24.35■■□□□ 1.49
CLTCL1P53675 AC027307.2-201ENST00000591252 911 ntBASIC24.35■■□□□ 1.49
CLTCL1P53675 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC24.35■■□□□ 1.49
CLTCL1P53675 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CLTCL1P53675 KRT8P49-201ENST00000604166 1432 ntBASIC24.35■■□□□ 1.49
CLTCL1P53675 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CLTCL1P53675 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CLTCL1P53675 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CLTCL1P53675 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC24.34■■□□□ 1.49
CLTCL1P53675 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CLTCL1P53675 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CLTCL1P53675 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
CLTCL1P53675 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC24.34■■□□□ 1.49
CLTCL1P53675 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CLTCL1P53675 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CLTCL1P53675 AC055876.3-201ENST00000431496 288 ntBASIC24.34■■□□□ 1.49
CLTCL1P53675 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC24.34■■□□□ 1.49
CLTCL1P53675 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC24.34■■□□□ 1.49
CLTCL1P53675 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms