Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUBP1P53384 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.13■□□□□ 0.33
NUBP1P53384 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NUBP1P53384 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUBP1P53384 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.13■□□□□ 0.33
NUBP1P53384 SYT14P1-202ENST00000600441 1448 ntBASIC17.13■□□□□ 0.33
NUBP1P53384 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.12■□□□□ 0.33
NUBP1P53384 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NUBP1P53384 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NUBP1P53384 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
NUBP1P53384 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUBP1P53384 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
NUBP1P53384 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NUBP1P53384 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NUBP1P53384 MTCO1P15-201ENST00000529569 1526 ntBASIC17.12■□□□□ 0.33
NUBP1P53384 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUBP1P53384 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.12■□□□□ 0.33
NUBP1P53384 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NUBP1P53384 AL157702.2-201ENST00000428292 1223 ntTSL 3 BASIC17.12■□□□□ 0.33
NUBP1P53384 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC17.12■□□□□ 0.33
NUBP1P53384 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.12■□□□□ 0.33
NUBP1P53384 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC17.12■□□□□ 0.33
NUBP1P53384 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NUBP1P53384 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUBP1P53384 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.12■□□□□ 0.33
NUBP1P53384 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUBP1P53384 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC17.12■□□□□ 0.33
NUBP1P53384 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.12■□□□□ 0.33
NUBP1P53384 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.12■□□□□ 0.33
NUBP1P53384 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.12■□□□□ 0.33
NUBP1P53384 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.12■□□□□ 0.33
NUBP1P53384 AC005412.3-201ENST00000580309 715 ntBASIC17.12■□□□□ 0.33
NUBP1P53384 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.12■□□□□ 0.33
NUBP1P53384 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NUBP1P53384 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC17.12■□□□□ 0.33
NUBP1P53384 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC17.12■□□□□ 0.33
NUBP1P53384 AC093783.1-201ENST00000612976 329 ntBASIC17.12■□□□□ 0.33
NUBP1P53384 AP000484.1-201ENST00000620067 1252 ntBASIC17.12■□□□□ 0.33
NUBP1P53384 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.12■□□□□ 0.33
NUBP1P53384 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUBP1P53384 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUBP1P53384 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUBP1P53384 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
NUBP1P53384 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUBP1P53384 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.12■□□□□ 0.33
NUBP1P53384 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.12■□□□□ 0.33
NUBP1P53384 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUBP1P53384 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUBP1P53384 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.11■□□□□ 0.33
NUBP1P53384 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NUBP1P53384 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUBP1P53384 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUBP1P53384 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NUBP1P53384 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUBP1P53384 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUBP1P53384 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NUBP1P53384 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUBP1P53384 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUBP1P53384 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUBP1P53384 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NUBP1P53384 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.11■□□□□ 0.33
NUBP1P53384 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.11■□□□□ 0.33
NUBP1P53384 HCG4-201ENST00000418983 998 ntBASIC17.11■□□□□ 0.33
NUBP1P53384 AC112492.5-201ENST00000421897 457 ntBASIC17.11■□□□□ 0.33
NUBP1P53384 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
NUBP1P53384 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NUBP1P53384 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.11■□□□□ 0.33
NUBP1P53384 AC103996.2-201ENST00000556763 915 ntTSL 3 BASIC17.11■□□□□ 0.33
NUBP1P53384 AP005482.1-201ENST00000563722 1273 ntBASIC17.11■□□□□ 0.33
NUBP1P53384 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.11■□□□□ 0.33
NUBP1P53384 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC17.11■□□□□ 0.33
NUBP1P53384 AC018529.1-201ENST00000613063 361 ntBASIC17.11■□□□□ 0.33
NUBP1P53384 AC007967.4-201ENST00000614700 386 ntBASIC17.11■□□□□ 0.33
NUBP1P53384 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.11■□□□□ 0.33
NUBP1P53384 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.11■□□□□ 0.33
NUBP1P53384 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.11■□□□□ 0.33
NUBP1P53384 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUBP1P53384 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUBP1P53384 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NUBP1P53384 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.11■□□□□ 0.33
NUBP1P53384 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.11■□□□□ 0.33
NUBP1P53384 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.11■□□□□ 0.33
NUBP1P53384 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.11■□□□□ 0.33
NUBP1P53384 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUBP1P53384 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUBP1P53384 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NUBP1P53384 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUBP1P53384 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NUBP1P53384 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUBP1P53384 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUBP1P53384 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUBP1P53384 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUBP1P53384 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.1■□□□□ 0.33
NUBP1P53384 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.1■□□□□ 0.33
NUBP1P53384 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.1■□□□□ 0.33
NUBP1P53384 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.1■□□□□ 0.33
NUBP1P53384 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUBP1P53384 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUBP1P53384 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.1■□□□□ 0.33
NUBP1P53384 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms