Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LBX1P52954 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.21■□□□□ 0.67
LBX1P52954 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LBX1P52954 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LBX1P52954 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LBX1P52954 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.21■□□□□ 0.67
LBX1P52954 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LBX1P52954 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LBX1P52954 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
LBX1P52954 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LBX1P52954 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LBX1P52954 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LBX1P52954 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC19.21■□□□□ 0.67
LBX1P52954 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LBX1P52954 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.21■□□□□ 0.67
LBX1P52954 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC19.21■□□□□ 0.67
LBX1P52954 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LBX1P52954 AC114501.2-201ENST00000439631 535 ntBASIC19.21■□□□□ 0.67
LBX1P52954 FO681548.1-201ENST00000455617 1132 ntBASIC19.21■□□□□ 0.67
LBX1P52954 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.21■□□□□ 0.67
LBX1P52954 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.21■□□□□ 0.67
LBX1P52954 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LBX1P52954 AL512361.1-201ENST00000554200 418 ntBASIC19.21■□□□□ 0.67
LBX1P52954 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC19.21■□□□□ 0.67
LBX1P52954 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.21■□□□□ 0.67
LBX1P52954 AC233724.13-201ENST00000598383 410 ntBASIC19.21■□□□□ 0.67
LBX1P52954 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC19.21■□□□□ 0.67
LBX1P52954 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.21■□□□□ 0.67
LBX1P52954 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
LBX1P52954 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.2■□□□□ 0.66
LBX1P52954 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LBX1P52954 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LBX1P52954 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LBX1P52954 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LBX1P52954 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LBX1P52954 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LBX1P52954 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LBX1P52954 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC19.2■□□□□ 0.66
LBX1P52954 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
LBX1P52954 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LBX1P52954 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.2■□□□□ 0.66
LBX1P52954 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.2■□□□□ 0.66
LBX1P52954 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.2■□□□□ 0.66
LBX1P52954 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
LBX1P52954 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.2■□□□□ 0.66
LBX1P52954 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC19.2■□□□□ 0.66
LBX1P52954 MIR4706-201ENST00000582134 82 ntBASIC19.2■□□□□ 0.66
LBX1P52954 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
LBX1P52954 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.2■□□□□ 0.66
LBX1P52954 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LBX1P52954 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.2■□□□□ 0.66
LBX1P52954 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LBX1P52954 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.2■□□□□ 0.66
LBX1P52954 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
LBX1P52954 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
LBX1P52954 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
LBX1P52954 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LBX1P52954 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.19■□□□□ 0.66
LBX1P52954 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LBX1P52954 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LBX1P52954 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.19■□□□□ 0.66
LBX1P52954 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LBX1P52954 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LBX1P52954 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LBX1P52954 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC19.19■□□□□ 0.66
LBX1P52954 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC19.19■□□□□ 0.66
LBX1P52954 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC19.19■□□□□ 0.66
LBX1P52954 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC19.19■□□□□ 0.66
LBX1P52954 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC19.19■□□□□ 0.66
LBX1P52954 AC105021.1-202ENST00000570572 669 ntBASIC19.19■□□□□ 0.66
LBX1P52954 AL133215.2-201ENST00000609242 977 ntBASIC19.19■□□□□ 0.66
LBX1P52954 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LBX1P52954 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LBX1P52954 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LBX1P52954 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
LBX1P52954 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LBX1P52954 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.19■□□□□ 0.66
LBX1P52954 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LBX1P52954 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
LBX1P52954 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LBX1P52954 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LBX1P52954 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
LBX1P52954 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LBX1P52954 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LBX1P52954 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LBX1P52954 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LBX1P52954 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LBX1P52954 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LBX1P52954 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.18■□□□□ 0.66
LBX1P52954 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC19.18■□□□□ 0.66
LBX1P52954 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LBX1P52954 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC19.18■□□□□ 0.66
LBX1P52954 CALR4P-201ENST00000431943 946 ntBASIC19.18■□□□□ 0.66
LBX1P52954 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC19.18■□□□□ 0.66
LBX1P52954 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LBX1P52954 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC19.18■□□□□ 0.66
LBX1P52954 AP001889.1-201ENST00000525414 633 ntBASIC19.18■□□□□ 0.66
LBX1P52954 HNRNPUP1-201ENST00000554987 333 ntBASIC19.18■□□□□ 0.66
LBX1P52954 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.18■□□□□ 0.66
LBX1P52954 DERL2-202ENST00000570848 657 ntTSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms