Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB28P51157 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RAB28P51157 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB28P51157 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RAB28P51157 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RAB28P51157 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB28P51157 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB28P51157 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RAB28P51157 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB28P51157 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RAB28P51157 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RAB28P51157 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB28P51157 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RAB28P51157 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB28P51157 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB28P51157 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.63■□□□□ 0.25
RAB28P51157 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.63■□□□□ 0.25
RAB28P51157 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RAB28P51157 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.63■□□□□ 0.25
RAB28P51157 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB28P51157 TERC-201ENST00000602385 541 ntBASIC16.63■□□□□ 0.25
RAB28P51157 AC008667.4-201ENST00000607370 168 ntBASIC16.63■□□□□ 0.25
RAB28P51157 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB28P51157 AC120114.3-201ENST00000611923 658 ntBASIC16.63■□□□□ 0.25
RAB28P51157 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RAB28P51157 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB28P51157 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
RAB28P51157 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB28P51157 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RAB28P51157 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
RAB28P51157 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB28P51157 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB28P51157 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB28P51157 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB28P51157 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RAB28P51157 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB28P51157 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB28P51157 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RAB28P51157 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB28P51157 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB28P51157 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB28P51157 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB28P51157 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB28P51157 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB28P51157 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB28P51157 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB28P51157 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB28P51157 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.62■□□□□ 0.25
RAB28P51157 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB28P51157 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.62■□□□□ 0.25
RAB28P51157 IGHV3-65-201ENST00000523210 341 ntBASIC16.62■□□□□ 0.25
RAB28P51157 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB28P51157 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.62■□□□□ 0.25
RAB28P51157 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.62■□□□□ 0.25
RAB28P51157 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RAB28P51157 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB28P51157 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB28P51157 GGTLC5P-201ENST00000617623 998 ntBASIC16.62■□□□□ 0.25
RAB28P51157 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RAB28P51157 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
RAB28P51157 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RAB28P51157 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB28P51157 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB28P51157 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB28P51157 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB28P51157 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB28P51157 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB28P51157 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB28P51157 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB28P51157 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB28P51157 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB28P51157 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB28P51157 LINC02012-201ENST00000608206 1725 ntBASIC16.62■□□□□ 0.25
RAB28P51157 PI4KAP1-204ENST00000612579 1703 ntBASIC16.62■□□□□ 0.25
RAB28P51157 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB28P51157 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB28P51157 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RAB28P51157 LETM1P2-201ENST00000597330 2178 ntBASIC16.61■□□□□ 0.25
RAB28P51157 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB28P51157 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RAB28P51157 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB28P51157 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB28P51157 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RAB28P51157 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.61■□□□□ 0.25
RAB28P51157 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
RAB28P51157 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RAB28P51157 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.61■□□□□ 0.25
RAB28P51157 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB28P51157 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB28P51157 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB28P51157 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RAB28P51157 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.61■□□□□ 0.25
RAB28P51157 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.61■□□□□ 0.25
RAB28P51157 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB28P51157 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.61■□□□□ 0.25
RAB28P51157 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB28P51157 RNA5SP415-201ENST00000517246 115 ntBASIC16.61■□□□□ 0.25
RAB28P51157 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB28P51157 UNC93B6-202ENST00000528242 690 ntBASIC16.61■□□□□ 0.25
RAB28P51157 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms