Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBP50607 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBP50607 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.18■□□□□ 0.5
TUBP50607 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBP50607 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBP50607 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBP50607 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TUBP50607 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TUBP50607 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBP50607 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TUBP50607 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.18■□□□□ 0.5
TUBP50607 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TUBP50607 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TUBP50607 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBP50607 AL391005.1-201ENST00000623953 2435 ntBASIC18.18■□□□□ 0.5
TUBP50607 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
TUBP50607 AC104109.2-201ENST00000602919 1418 ntBASIC18.18■□□□□ 0.5
TUBP50607 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TUBP50607 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TUBP50607 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
TUBP50607 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBP50607 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.18■□□□□ 0.5
TUBP50607 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TUBP50607 RNA5SP415-201ENST00000517246 115 ntBASIC18.18■□□□□ 0.5
TUBP50607 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.18■□□□□ 0.5
TUBP50607 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.18■□□□□ 0.5
TUBP50607 AL139424.1-201ENST00000607572 797 ntBASIC18.18■□□□□ 0.5
TUBP50607 AC005593.1-201ENST00000624894 515 ntBASIC18.18■□□□□ 0.5
TUBP50607 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.18■□□□□ 0.5
TUBP50607 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBP50607 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TUBP50607 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TUBP50607 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBP50607 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TUBP50607 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBP50607 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBP50607 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBP50607 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.18■□□□□ 0.5
TUBP50607 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TUBP50607 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.18■□□□□ 0.5
TUBP50607 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBP50607 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBP50607 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.17■□□□□ 0.5
TUBP50607 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TUBP50607 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBP50607 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBP50607 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBP50607 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.17■□□□□ 0.5
TUBP50607 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TUBP50607 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.17■□□□□ 0.5
TUBP50607 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.17■□□□□ 0.5
TUBP50607 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBP50607 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBP50607 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TUBP50607 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.17■□□□□ 0.5
TUBP50607 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBP50607 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TUBP50607 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.17■□□□□ 0.5
TUBP50607 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.17■□□□□ 0.5
TUBP50607 AC034105.1-201ENST00000563488 319 ntBASIC18.17■□□□□ 0.5
TUBP50607 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
TUBP50607 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.17■□□□□ 0.5
TUBP50607 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBP50607 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.17■□□□□ 0.5
TUBP50607 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBP50607 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBP50607 CICP6-201ENST00000457191 2729 ntBASIC18.17■□□□□ 0.5
TUBP50607 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBP50607 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
TUBP50607 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.17■□□□□ 0.5
TUBP50607 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBP50607 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBP50607 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.17■□□□□ 0.5
TUBP50607 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBP50607 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.17■□□□□ 0.5
TUBP50607 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TUBP50607 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBP50607 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBP50607 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBP50607 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TUBP50607 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBP50607 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.17■□□□□ 0.5
TUBP50607 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
TUBP50607 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TUBP50607 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TUBP50607 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TUBP50607 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TUBP50607 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.16■□□□□ 0.5
TUBP50607 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TUBP50607 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TUBP50607 LINC00304-203ENST00000565008 1864 ntBASIC18.16■□□□□ 0.5
TUBP50607 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
TUBP50607 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TUBP50607 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TUBP50607 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TUBP50607 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.16■□□□□ 0.5
TUBP50607 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.16■□□□□ 0.5
TUBP50607 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.16■□□□□ 0.5
TUBP50607 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TUBP50607 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms