Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.27■□□□□ 0.52
BRCC3P46736 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
BRCC3P46736 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.27■□□□□ 0.52
BRCC3P46736 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BRCC3P46736 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.27■□□□□ 0.52
BRCC3P46736 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
BRCC3P46736 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.27■□□□□ 0.52
BRCC3P46736 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.27■□□□□ 0.52
BRCC3P46736 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.27■□□□□ 0.52
BRCC3P46736 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
BRCC3P46736 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.27■□□□□ 0.52
BRCC3P46736 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.27■□□□□ 0.52
BRCC3P46736 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BRCC3P46736 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BRCC3P46736 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.27■□□□□ 0.52
BRCC3P46736 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.27■□□□□ 0.52
BRCC3P46736 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
BRCC3P46736 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BRCC3P46736 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BRCC3P46736 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BRCC3P46736 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
BRCC3P46736 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
BRCC3P46736 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.27■□□□□ 0.51
BRCC3P46736 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BRCC3P46736 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
BRCC3P46736 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BRCC3P46736 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
BRCC3P46736 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
BRCC3P46736 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
BRCC3P46736 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
BRCC3P46736 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
BRCC3P46736 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
BRCC3P46736 GNAS-203ENST00000306120 1878 ntBASIC18.26■□□□□ 0.51
BRCC3P46736 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRCC3P46736 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRCC3P46736 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRCC3P46736 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BRCC3P46736 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
BRCC3P46736 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
BRCC3P46736 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRCC3P46736 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BRCC3P46736 SLC25A1P3-201ENST00000395415 828 ntBASIC18.26■□□□□ 0.51
BRCC3P46736 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
BRCC3P46736 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.26■□□□□ 0.51
BRCC3P46736 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BRCC3P46736 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.26■□□□□ 0.51
BRCC3P46736 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.26■□□□□ 0.51
BRCC3P46736 AC091812.2-201ENST00000619081 385 ntBASIC18.26■□□□□ 0.51
BRCC3P46736 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRCC3P46736 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.26■□□□□ 0.51
BRCC3P46736 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.26■□□□□ 0.51
BRCC3P46736 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
BRCC3P46736 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
BRCC3P46736 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.26■□□□□ 0.51
BRCC3P46736 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BRCC3P46736 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRCC3P46736 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
BRCC3P46736 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.26■□□□□ 0.51
BRCC3P46736 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRCC3P46736 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
BRCC3P46736 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.25■□□□□ 0.51
BRCC3P46736 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.25■□□□□ 0.51
BRCC3P46736 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
BRCC3P46736 AC129492.6-201ENST00000611383 1305 ntBASIC18.25■□□□□ 0.51
BRCC3P46736 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.25■□□□□ 0.51
BRCC3P46736 AC068880.1-201ENST00000507289 2297 ntBASIC18.25■□□□□ 0.51
BRCC3P46736 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.25■□□□□ 0.51
BRCC3P46736 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
BRCC3P46736 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
BRCC3P46736 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.25■□□□□ 0.51
BRCC3P46736 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BRCC3P46736 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BRCC3P46736 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
BRCC3P46736 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
BRCC3P46736 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRCC3P46736 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRCC3P46736 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BRCC3P46736 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRCC3P46736 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRCC3P46736 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.25■□□□□ 0.51
BRCC3P46736 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
BRCC3P46736 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.25■□□□□ 0.51
BRCC3P46736 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
BRCC3P46736 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRCC3P46736 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.25■□□□□ 0.51
BRCC3P46736 AC068137.2-201ENST00000605408 478 ntBASIC18.25■□□□□ 0.51
BRCC3P46736 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BRCC3P46736 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.25■□□□□ 0.51
BRCC3P46736 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRCC3P46736 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BRCC3P46736 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRCC3P46736 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRCC3P46736 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRCC3P46736 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRCC3P46736 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BRCC3P46736 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
BRCC3P46736 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.24■□□□□ 0.51
BRCC3P46736 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRCC3P46736 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
BRCC3P46736 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms