Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.16□□□□□ -0.14
NKX2-1P43699 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.16□□□□□ -0.14
NKX2-1P43699 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
NKX2-1P43699 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
NKX2-1P43699 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.16□□□□□ -0.14
NKX2-1P43699 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-1P43699 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
NKX2-1P43699 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-1P43699 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-1P43699 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-1P43699 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
NKX2-1P43699 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-1P43699 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-1P43699 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.16□□□□□ -0.14
NKX2-1P43699 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.16□□□□□ -0.14
NKX2-1P43699 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
NKX2-1P43699 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
NKX2-1P43699 MIR718-201ENST00000390190 70 ntBASIC14.16□□□□□ -0.14
NKX2-1P43699 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-1P43699 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
NKX2-1P43699 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.16□□□□□ -0.14
NKX2-1P43699 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-1P43699 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.16□□□□□ -0.14
NKX2-1P43699 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.16□□□□□ -0.14
NKX2-1P43699 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-1P43699 AC124947.2-201ENST00000547118 1133 ntBASIC14.16□□□□□ -0.14
NKX2-1P43699 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.16□□□□□ -0.14
NKX2-1P43699 AC233702.5-201ENST00000584107 538 ntBASIC14.16□□□□□ -0.14
NKX2-1P43699 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.16□□□□□ -0.14
NKX2-1P43699 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.16□□□□□ -0.14
NKX2-1P43699 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.16□□□□□ -0.14
NKX2-1P43699 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-1P43699 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-1P43699 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-1P43699 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-1P43699 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.16□□□□□ -0.14
NKX2-1P43699 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-1P43699 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.15□□□□□ -0.14
NKX2-1P43699 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 KRT8P9-201ENST00000558927 1449 ntBASIC14.15□□□□□ -0.14
NKX2-1P43699 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
NKX2-1P43699 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
NKX2-1P43699 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
NKX2-1P43699 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.15□□□□□ -0.14
NKX2-1P43699 AL662844.4-201ENST00000606367 2838 ntBASIC14.15□□□□□ -0.14
NKX2-1P43699 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 HYMAI-201ENST00000635591 3347 ntBASIC14.15□□□□□ -0.14
NKX2-1P43699 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
NKX2-1P43699 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NKX2-1P43699 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NKX2-1P43699 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.15□□□□□ -0.14
NKX2-1P43699 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
NKX2-1P43699 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NKX2-1P43699 SLC25A1P3-201ENST00000395415 828 ntBASIC14.15□□□□□ -0.14
NKX2-1P43699 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.15□□□□□ -0.14
NKX2-1P43699 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.15□□□□□ -0.14
NKX2-1P43699 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.15□□□□□ -0.14
NKX2-1P43699 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.15□□□□□ -0.14
NKX2-1P43699 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.15□□□□□ -0.14
NKX2-1P43699 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
NKX2-1P43699 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.15□□□□□ -0.14
NKX2-1P43699 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.15□□□□□ -0.14
NKX2-1P43699 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NKX2-1P43699 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-1P43699 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.15□□□□□ -0.14
NKX2-1P43699 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
NKX2-1P43699 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
NKX2-1P43699 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
NKX2-1P43699 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
NKX2-1P43699 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms