Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXD11P31277 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
HOXD11P31277 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXD11P31277 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXD11P31277 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
HOXD11P31277 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.66■□□□□ 0.58
HOXD11P31277 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXD11P31277 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXD11P31277 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXD11P31277 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXD11P31277 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXD11P31277 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXD11P31277 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXD11P31277 MTCYBP5-201ENST00000423752 1135 ntBASIC18.66■□□□□ 0.58
HOXD11P31277 AL450309.1-201ENST00000423792 656 ntBASIC18.66■□□□□ 0.58
HOXD11P31277 E2F6P1-201ENST00000428850 745 ntBASIC18.66■□□□□ 0.58
HOXD11P31277 KCNQ5-AS1-201ENST00000429832 1101 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXD11P31277 E2F6P3-201ENST00000441743 743 ntBASIC18.66■□□□□ 0.58
HOXD11P31277 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXD11P31277 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXD11P31277 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXD11P31277 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXD11P31277 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXD11P31277 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXD11P31277 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXD11P31277 AC084824.2-201ENST00000548906 345 ntBASIC18.66■□□□□ 0.58
HOXD11P31277 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.66■□□□□ 0.58
HOXD11P31277 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HOXD11P31277 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HOXD11P31277 AC123767.1-202ENST00000620407 817 ntBASIC18.66■□□□□ 0.58
HOXD11P31277 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXD11P31277 MBD5-221ENST00000637159 902 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXD11P31277 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HOXD11P31277 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXD11P31277 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXD11P31277 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HOXD11P31277 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
HOXD11P31277 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXD11P31277 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXD11P31277 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXD11P31277 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXD11P31277 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXD11P31277 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXD11P31277 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXD11P31277 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXD11P31277 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXD11P31277 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD11P31277 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
HOXD11P31277 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HOXD11P31277 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HOXD11P31277 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD11P31277 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD11P31277 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD11P31277 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXD11P31277 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD11P31277 SNORD116-8-201ENST00000384365 95 ntBASIC18.65■□□□□ 0.58
HOXD11P31277 AC016956.1-201ENST00000393026 1108 ntBASIC18.65■□□□□ 0.58
HOXD11P31277 ETF1P1-206ENST00000427296 984 ntBASIC18.65■□□□□ 0.58
HOXD11P31277 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXD11P31277 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
HOXD11P31277 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXD11P31277 AC108734.3-201ENST00000481241 1165 ntBASIC18.65■□□□□ 0.58
HOXD11P31277 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.65■□□□□ 0.58
HOXD11P31277 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.65■□□□□ 0.58
HOXD11P31277 AC063924.1-201ENST00000546680 673 ntBASIC18.65■□□□□ 0.58
HOXD11P31277 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC18.65■□□□□ 0.58
HOXD11P31277 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.65■□□□□ 0.58
HOXD11P31277 LINC00557-201ENST00000563184 1279 ntBASIC18.65■□□□□ 0.58
HOXD11P31277 AP000919.1-202ENST00000581139 1264 ntBASIC18.65■□□□□ 0.58
HOXD11P31277 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXD11P31277 AL035417.2-201ENST00000603887 796 ntBASIC18.65■□□□□ 0.58
HOXD11P31277 TEX41-255ENST00000626404 610 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXD11P31277 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD11P31277 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD11P31277 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
HOXD11P31277 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXD11P31277 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HOXD11P31277 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD11P31277 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXD11P31277 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXD11P31277 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD11P31277 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD11P31277 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.64■□□□□ 0.58
HOXD11P31277 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HOXD11P31277 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD11P31277 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD11P31277 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXD11P31277 FRG1-201ENST00000226798 1074 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD11P31277 TMED6-201ENST00000288025 938 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD11P31277 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD11P31277 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD11P31277 RNU6-623P-201ENST00000363143 105 ntBASIC18.64■□□□□ 0.57
HOXD11P31277 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXD11P31277 AL590084.2-201ENST00000401481 382 ntBASIC18.64■□□□□ 0.57
HOXD11P31277 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXD11P31277 AC023274.1-201ENST00000418278 595 ntBASIC18.64■□□□□ 0.57
HOXD11P31277 POM121L3P-201ENST00000419331 1163 ntBASIC18.64■□□□□ 0.57
HOXD11P31277 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.64■□□□□ 0.57
HOXD11P31277 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD11P31277 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms