Protein–RNA interactions for Protein: P26842

CD27, CD27 antigen, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD27P26842 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.79■□□□□ 0.28
CD27P26842 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CD27P26842 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD27P26842 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD27P26842 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD27P26842 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD27P26842 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.79■□□□□ 0.28
CD27P26842 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.79■□□□□ 0.28
CD27P26842 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD27P26842 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.79■□□□□ 0.28
CD27P26842 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD27P26842 RNA5SP421-201ENST00000516864 134 ntBASIC16.79■□□□□ 0.28
CD27P26842 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.79■□□□□ 0.28
CD27P26842 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.79■□□□□ 0.28
CD27P26842 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.79■□□□□ 0.28
CD27P26842 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.79■□□□□ 0.28
CD27P26842 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.79■□□□□ 0.28
CD27P26842 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.79■□□□□ 0.28
CD27P26842 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD27P26842 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
CD27P26842 AL355312.1-201ENST00000407115 2176 ntBASIC16.79■□□□□ 0.28
CD27P26842 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD27P26842 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD27P26842 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD27P26842 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CD27P26842 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD27P26842 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD27P26842 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD27P26842 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.79■□□□□ 0.28
CD27P26842 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD27P26842 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD27P26842 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD27P26842 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD27P26842 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD27P26842 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.78■□□□□ 0.28
CD27P26842 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.78■□□□□ 0.28
CD27P26842 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD27P26842 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CD27P26842 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD27P26842 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.78■□□□□ 0.28
CD27P26842 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD27P26842 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD27P26842 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CD27P26842 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CD27P26842 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CD27P26842 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CD27P26842 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CD27P26842 HCG4-201ENST00000418983 998 ntBASIC16.78■□□□□ 0.28
CD27P26842 FAM58DP-201ENST00000428076 619 ntBASIC16.78■□□□□ 0.28
CD27P26842 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.78■□□□□ 0.28
CD27P26842 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.78■□□□□ 0.28
CD27P26842 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD27P26842 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.78■□□□□ 0.28
CD27P26842 IGHV3-62-201ENST00000520057 340 ntBASIC16.78■□□□□ 0.28
CD27P26842 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.78■□□□□ 0.28
CD27P26842 AC109635.5-201ENST00000533593 962 ntBASIC16.78■□□□□ 0.28
CD27P26842 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.78■□□□□ 0.28
CD27P26842 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD27P26842 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.78■□□□□ 0.28
CD27P26842 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.78■□□□□ 0.28
CD27P26842 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CD27P26842 AP001059.3-201ENST00000619053 235 ntBASIC16.78■□□□□ 0.28
CD27P26842 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
CD27P26842 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CD27P26842 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD27P26842 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD27P26842 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CD27P26842 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CD27P26842 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CD27P26842 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD27P26842 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.78■□□□□ 0.28
CD27P26842 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD27P26842 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CD27P26842 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD27P26842 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.77■□□□□ 0.28
CD27P26842 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
CD27P26842 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CD27P26842 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CD27P26842 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD27P26842 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD27P26842 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD27P26842 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD27P26842 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.77■□□□□ 0.28
CD27P26842 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.77■□□□□ 0.28
CD27P26842 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD27P26842 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD27P26842 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.77■□□□□ 0.28
CD27P26842 AL035633.1-201ENST00000406139 838 ntBASIC16.77■□□□□ 0.28
CD27P26842 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CD27P26842 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD27P26842 SPCS2P4-201ENST00000436160 681 ntBASIC16.77■□□□□ 0.28
CD27P26842 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD27P26842 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD27P26842 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.77■□□□□ 0.28
CD27P26842 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.77■□□□□ 0.28
CD27P26842 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CD27P26842 DUX4L27-201ENST00000554796 1261 ntBASIC16.77■□□□□ 0.28
CD27P26842 KRT8P23-201ENST00000560090 1207 ntBASIC16.77■□□□□ 0.28
CD27P26842 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD27P26842 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms