Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TOP1P11387 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.26■□□□□ 0.83
TOP1P11387 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TOP1P11387 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.26■□□□□ 0.83
TOP1P11387 AC034105.1-201ENST00000563488 319 ntBASIC20.26■□□□□ 0.83
TOP1P11387 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.26■□□□□ 0.83
TOP1P11387 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TOP1P11387 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TOP1P11387 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TOP1P11387 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TOP1P11387 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TOP1P11387 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.26■□□□□ 0.83
TOP1P11387 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TOP1P11387 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TOP1P11387 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TOP1P11387 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.26■□□□□ 0.83
TOP1P11387 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TOP1P11387 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TOP1P11387 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TOP1P11387 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.25■□□□□ 0.83
TOP1P11387 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TOP1P11387 AC009947.1-201ENST00000444350 727 ntBASIC20.25■□□□□ 0.83
TOP1P11387 RPS15P9-201ENST00000494093 319 ntBASIC20.25■□□□□ 0.83
TOP1P11387 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.25■□□□□ 0.83
TOP1P11387 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.25■□□□□ 0.83
TOP1P11387 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TOP1P11387 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.25■□□□□ 0.83
TOP1P11387 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
TOP1P11387 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TOP1P11387 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TOP1P11387 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TOP1P11387 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TOP1P11387 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TOP1P11387 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TOP1P11387 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TOP1P11387 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TOP1P11387 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TOP1P11387 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.24■□□□□ 0.83
TOP1P11387 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TOP1P11387 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.24■□□□□ 0.83
TOP1P11387 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TOP1P11387 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
TOP1P11387 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TOP1P11387 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TOP1P11387 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TOP1P11387 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TOP1P11387 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.24■□□□□ 0.83
TOP1P11387 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TOP1P11387 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TOP1P11387 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
TOP1P11387 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TOP1P11387 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TOP1P11387 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TOP1P11387 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TOP1P11387 PMS2P1-201ENST00000431037 1228 ntBASIC20.24■□□□□ 0.83
TOP1P11387 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TOP1P11387 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
TOP1P11387 AL805961.1-202ENST00000641562 540 ntBASIC20.24■□□□□ 0.83
TOP1P11387 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.24■□□□□ 0.83
TOP1P11387 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TOP1P11387 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.24■□□□□ 0.83
TOP1P11387 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
TOP1P11387 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TOP1P11387 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TOP1P11387 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TOP1P11387 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TOP1P11387 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TOP1P11387 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TOP1P11387 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.23■□□□□ 0.83
TOP1P11387 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TOP1P11387 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TOP1P11387 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TOP1P11387 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.23■□□□□ 0.83
TOP1P11387 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.23■□□□□ 0.83
TOP1P11387 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.23■□□□□ 0.83
TOP1P11387 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.23■□□□□ 0.83
TOP1P11387 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TOP1P11387 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TOP1P11387 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.23■□□□□ 0.83
TOP1P11387 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TOP1P11387 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
TOP1P11387 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TOP1P11387 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TOP1P11387 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TOP1P11387 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.23■□□□□ 0.83
TOP1P11387 AL590787.1-201ENST00000568856 1315 ntBASIC20.23■□□□□ 0.83
TOP1P11387 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.23■□□□□ 0.83
TOP1P11387 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.23■□□□□ 0.83
TOP1P11387 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TOP1P11387 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TOP1P11387 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.23■□□□□ 0.83
TOP1P11387 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TOP1P11387 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TOP1P11387 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TOP1P11387 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TOP1P11387 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TOP1P11387 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TOP1P11387 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.22■□□□□ 0.83
TOP1P11387 PTCHD3P3-201ENST00000403073 906 ntBASIC20.22■□□□□ 0.83
TOP1P11387 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms