Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RARAP10276 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
RARAP10276 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RARAP10276 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RARAP10276 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
RARAP10276 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RARAP10276 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RARAP10276 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.12■□□□□ 0.49
RARAP10276 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RARAP10276 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RARAP10276 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.12■□□□□ 0.49
RARAP10276 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RARAP10276 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RARAP10276 POM121L3P-201ENST00000419331 1163 ntBASIC18.12■□□□□ 0.49
RARAP10276 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.12■□□□□ 0.49
RARAP10276 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.12■□□□□ 0.49
RARAP10276 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.12■□□□□ 0.49
RARAP10276 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.12■□□□□ 0.49
RARAP10276 STK19B-204ENST00000512515 211 ntBASIC18.12■□□□□ 0.49
RARAP10276 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.12■□□□□ 0.49
RARAP10276 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.12■□□□□ 0.49
RARAP10276 AC099336.1-202ENST00000602961 463 ntBASIC18.12■□□□□ 0.49
RARAP10276 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RARAP10276 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.12■□□□□ 0.49
RARAP10276 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RARAP10276 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RARAP10276 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RARAP10276 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RARAP10276 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.12■□□□□ 0.49
RARAP10276 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.12■□□□□ 0.49
RARAP10276 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.12■□□□□ 0.49
RARAP10276 AC009336.1-201ENST00000608941 1553 ntBASIC18.12■□□□□ 0.49
RARAP10276 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
RARAP10276 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.12■□□□□ 0.49
RARAP10276 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RARAP10276 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RARAP10276 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RARAP10276 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RARAP10276 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
RARAP10276 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.11■□□□□ 0.49
RARAP10276 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RARAP10276 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RARAP10276 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RARAP10276 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.11■□□□□ 0.49
RARAP10276 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RARAP10276 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RARAP10276 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RARAP10276 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RARAP10276 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.11■□□□□ 0.49
RARAP10276 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RARAP10276 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
RARAP10276 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RARAP10276 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RARAP10276 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.11■□□□□ 0.49
RARAP10276 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.11■□□□□ 0.49
RARAP10276 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.11■□□□□ 0.49
RARAP10276 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RARAP10276 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.11■□□□□ 0.49
RARAP10276 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.11■□□□□ 0.49
RARAP10276 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.11■□□□□ 0.49
RARAP10276 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.11■□□□□ 0.49
RARAP10276 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.11■□□□□ 0.49
RARAP10276 AC073592.5-201ENST00000624854 528 ntBASIC18.11■□□□□ 0.49
RARAP10276 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.11■□□□□ 0.49
RARAP10276 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RARAP10276 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.11■□□□□ 0.49
RARAP10276 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RARAP10276 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
RARAP10276 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RARAP10276 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RARAP10276 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RARAP10276 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.11■□□□□ 0.49
RARAP10276 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RARAP10276 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RARAP10276 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RARAP10276 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.11■□□□□ 0.49
RARAP10276 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RARAP10276 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RARAP10276 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.11■□□□□ 0.49
RARAP10276 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RARAP10276 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
RARAP10276 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
RARAP10276 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RARAP10276 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RARAP10276 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RARAP10276 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
RARAP10276 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RARAP10276 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.1■□□□□ 0.49
RARAP10276 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RARAP10276 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RARAP10276 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RARAP10276 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RARAP10276 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RARAP10276 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RARAP10276 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RARAP10276 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RARAP10276 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RARAP10276 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.1■□□□□ 0.49
RARAP10276 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RARAP10276 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms