Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
THBS1P07996 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
THBS1P07996 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
THBS1P07996 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.89■□□□□ 0.13
THBS1P07996 SPDYE21P-201ENST00000413323 827 ntBASIC15.89■□□□□ 0.13
THBS1P07996 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.89■□□□□ 0.13
THBS1P07996 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.89■□□□□ 0.13
THBS1P07996 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
THBS1P07996 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.89■□□□□ 0.13
THBS1P07996 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
THBS1P07996 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
THBS1P07996 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
THBS1P07996 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
THBS1P07996 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
THBS1P07996 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
THBS1P07996 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
THBS1P07996 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
THBS1P07996 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
THBS1P07996 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
THBS1P07996 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.89■□□□□ 0.13
THBS1P07996 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
THBS1P07996 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.89■□□□□ 0.13
THBS1P07996 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
THBS1P07996 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
THBS1P07996 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
THBS1P07996 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
THBS1P07996 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
THBS1P07996 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
THBS1P07996 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
THBS1P07996 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
THBS1P07996 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
THBS1P07996 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
THBS1P07996 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
THBS1P07996 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.88■□□□□ 0.13
THBS1P07996 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
THBS1P07996 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
THBS1P07996 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
THBS1P07996 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
THBS1P07996 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
THBS1P07996 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.88■□□□□ 0.13
THBS1P07996 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
THBS1P07996 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
THBS1P07996 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
THBS1P07996 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.88■□□□□ 0.13
THBS1P07996 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.88■□□□□ 0.13
THBS1P07996 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.88■□□□□ 0.13
THBS1P07996 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
THBS1P07996 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
THBS1P07996 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.88■□□□□ 0.13
THBS1P07996 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.88■□□□□ 0.13
THBS1P07996 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.88■□□□□ 0.13
THBS1P07996 AC012313.10-201ENST00000623509 926 ntBASIC15.88■□□□□ 0.13
THBS1P07996 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.88■□□□□ 0.13
THBS1P07996 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
THBS1P07996 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
THBS1P07996 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
THBS1P07996 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.88■□□□□ 0.13
THBS1P07996 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
THBS1P07996 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
THBS1P07996 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.88■□□□□ 0.13
THBS1P07996 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
THBS1P07996 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
THBS1P07996 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
THBS1P07996 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.88■□□□□ 0.13
THBS1P07996 FRMD8P1-201ENST00000440433 1524 ntBASIC15.88■□□□□ 0.13
THBS1P07996 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.88■□□□□ 0.13
THBS1P07996 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.88■□□□□ 0.13
THBS1P07996 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
THBS1P07996 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
THBS1P07996 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
THBS1P07996 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
THBS1P07996 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
THBS1P07996 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.87■□□□□ 0.13
THBS1P07996 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
THBS1P07996 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.87■□□□□ 0.13
THBS1P07996 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
THBS1P07996 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
THBS1P07996 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
THBS1P07996 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
THBS1P07996 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
THBS1P07996 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
THBS1P07996 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.87■□□□□ 0.13
THBS1P07996 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.87■□□□□ 0.13
THBS1P07996 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
THBS1P07996 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
THBS1P07996 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
THBS1P07996 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.87■□□□□ 0.13
THBS1P07996 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.87■□□□□ 0.13
THBS1P07996 AGGF1P2-201ENST00000426656 2106 ntBASIC15.87■□□□□ 0.13
THBS1P07996 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
THBS1P07996 ABCD1P5-201ENST00000445663 754 ntBASIC15.87■□□□□ 0.13
THBS1P07996 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.87■□□□□ 0.13
THBS1P07996 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.87■□□□□ 0.13
THBS1P07996 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.87■□□□□ 0.13
THBS1P07996 AC099336.1-202ENST00000602961 463 ntBASIC15.87■□□□□ 0.13
THBS1P07996 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.87■□□□□ 0.13
THBS1P07996 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
THBS1P07996 AC073592.4-201ENST00000623827 446 ntBASIC15.87■□□□□ 0.13
THBS1P07996 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
THBS1P07996 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms