Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
APPP05067 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
APPP05067 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.71■□□□□ 0.91
APPP05067 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.71■□□□□ 0.91
APPP05067 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.71■□□□□ 0.91
APPP05067 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.71■□□□□ 0.91
APPP05067 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.71■□□□□ 0.91
APPP05067 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.71■□□□□ 0.91
APPP05067 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
APPP05067 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
APPP05067 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.71■□□□□ 0.91
APPP05067 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
APPP05067 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
APPP05067 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
APPP05067 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
APPP05067 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.71■□□□□ 0.91
APPP05067 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.7■□□□□ 0.91
APPP05067 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
APPP05067 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
APPP05067 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
APPP05067 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APPP05067 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.7■□□□□ 0.9
APPP05067 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.7■□□□□ 0.9
APPP05067 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
APPP05067 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APPP05067 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
APPP05067 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
APPP05067 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APPP05067 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
APPP05067 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.7■□□□□ 0.9
APPP05067 AC004706.3-202ENST00000621574 984 ntBASIC20.7■□□□□ 0.9
APPP05067 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APPP05067 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.7■□□□□ 0.9
APPP05067 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APPP05067 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
APPP05067 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APPP05067 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
APPP05067 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
APPP05067 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
APPP05067 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
APPP05067 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.7■□□□□ 0.9
APPP05067 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
APPP05067 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APPP05067 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
APPP05067 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
APPP05067 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APPP05067 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APPP05067 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
APPP05067 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
APPP05067 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
APPP05067 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
APPP05067 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
APPP05067 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APPP05067 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
APPP05067 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
APPP05067 PP12613-201ENST00000424958 2230 ntBASIC20.69■□□□□ 0.9
APPP05067 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
APPP05067 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APPP05067 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
APPP05067 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
APPP05067 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
APPP05067 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.69■□□□□ 0.9
APPP05067 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.69■□□□□ 0.9
APPP05067 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
APPP05067 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.69■□□□□ 0.9
APPP05067 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
APPP05067 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APPP05067 AC120114.3-201ENST00000611923 658 ntBASIC20.69■□□□□ 0.9
APPP05067 MIR1199-201ENST00000621445 119 ntBASIC20.69■□□□□ 0.9
APPP05067 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.69■□□□□ 0.9
APPP05067 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APPP05067 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
APPP05067 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
APPP05067 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.69■□□□□ 0.9
APPP05067 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
APPP05067 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APPP05067 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
APPP05067 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
APPP05067 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
APPP05067 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APPP05067 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.69■□□□□ 0.9
APPP05067 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
APPP05067 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
APPP05067 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
APPP05067 AC006504.4-201ENST00000592118 1568 ntBASIC20.68■□□□□ 0.9
APPP05067 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APPP05067 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APPP05067 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.68■□□□□ 0.9
APPP05067 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.68■□□□□ 0.9
APPP05067 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
APPP05067 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.68■□□□□ 0.9
APPP05067 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APPP05067 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
APPP05067 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APPP05067 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.68■□□□□ 0.9
APPP05067 CROCCP2-202ENST00000412962 2773 ntBASIC20.68■□□□□ 0.9
APPP05067 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
APPP05067 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APPP05067 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
APPP05067 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms