Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT6AP02538 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT6AP02538 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT6AP02538 AC009336.1-201ENST00000608941 1553 ntBASIC16.74■□□□□ 0.27
KRT6AP02538 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT6AP02538 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.74■□□□□ 0.27
KRT6AP02538 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT6AP02538 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
KRT6AP02538 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.74■□□□□ 0.27
KRT6AP02538 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT6AP02538 AC091607.1-201ENST00000490318 1060 ntBASIC16.74■□□□□ 0.27
KRT6AP02538 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.74■□□□□ 0.27
KRT6AP02538 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.74■□□□□ 0.27
KRT6AP02538 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT6AP02538 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.74■□□□□ 0.27
KRT6AP02538 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT6AP02538 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.74■□□□□ 0.27
KRT6AP02538 AL590326.2-201ENST00000625139 305 ntBASIC16.74■□□□□ 0.27
KRT6AP02538 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT6AP02538 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT6AP02538 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT6AP02538 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT6AP02538 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT6AP02538 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT6AP02538 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT6AP02538 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT6AP02538 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT6AP02538 AC233702.3-201ENST00000578656 1387 ntBASIC16.74■□□□□ 0.27
KRT6AP02538 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
KRT6AP02538 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT6AP02538 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT6AP02538 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
KRT6AP02538 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT6AP02538 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT6AP02538 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
KRT6AP02538 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT6AP02538 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT6AP02538 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT6AP02538 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT6AP02538 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT6AP02538 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT6AP02538 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT6AP02538 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
KRT6AP02538 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
KRT6AP02538 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT6AP02538 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT6AP02538 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.73■□□□□ 0.27
KRT6AP02538 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.73■□□□□ 0.27
KRT6AP02538 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT6AP02538 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT6AP02538 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
KRT6AP02538 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT6AP02538 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
KRT6AP02538 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT6AP02538 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT6AP02538 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.73■□□□□ 0.27
KRT6AP02538 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT6AP02538 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.73■□□□□ 0.27
KRT6AP02538 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.73■□□□□ 0.27
KRT6AP02538 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
KRT6AP02538 AC087388.1-201ENST00000571370 1112 ntBASIC16.73■□□□□ 0.27
KRT6AP02538 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
KRT6AP02538 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
KRT6AP02538 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT6AP02538 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT6AP02538 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT6AP02538 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.73■□□□□ 0.27
KRT6AP02538 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT6AP02538 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT6AP02538 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.73■□□□□ 0.27
KRT6AP02538 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT6AP02538 TP73-AS1-210ENST00000637775 1455 ntBASIC16.73■□□□□ 0.27
KRT6AP02538 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT6AP02538 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
KRT6AP02538 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
KRT6AP02538 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT6AP02538 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT6AP02538 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
KRT6AP02538 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT6AP02538 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT6AP02538 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
KRT6AP02538 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT6AP02538 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT6AP02538 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
KRT6AP02538 AC084018.2-201ENST00000613093 2607 ntBASIC16.72■□□□□ 0.27
KRT6AP02538 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.72■□□□□ 0.27
KRT6AP02538 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.72■□□□□ 0.27
KRT6AP02538 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT6AP02538 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT6AP02538 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT6AP02538 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
KRT6AP02538 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT6AP02538 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT6AP02538 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT6AP02538 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.72■□□□□ 0.27
KRT6AP02538 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
KRT6AP02538 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT6AP02538 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT6AP02538 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
KRT6AP02538 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms