Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
CLPTM1O96005 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.34■□□□□ 0.21
CLPTM1O96005 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.34■□□□□ 0.21
CLPTM1O96005 PRSS44-201ENST00000515154 1146 ntBASIC16.34■□□□□ 0.21
CLPTM1O96005 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.34■□□□□ 0.21
CLPTM1O96005 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 AC100803.2-201ENST00000562459 1963 ntBASIC16.34■□□□□ 0.21
CLPTM1O96005 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 AC144831.1-201ENST00000573312 2656 ntBASIC16.34■□□□□ 0.21
CLPTM1O96005 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CLPTM1O96005 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CLPTM1O96005 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.34■□□□□ 0.21
CLPTM1O96005 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CLPTM1O96005 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.34■□□□□ 0.21
CLPTM1O96005 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.34■□□□□ 0.21
CLPTM1O96005 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CLPTM1O96005 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CLPTM1O96005 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.34■□□□□ 0.21
CLPTM1O96005 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.34■□□□□ 0.21
CLPTM1O96005 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLPTM1O96005 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLPTM1O96005 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.33■□□□□ 0.21
CLPTM1O96005 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CLPTM1O96005 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLPTM1O96005 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.33■□□□□ 0.21
CLPTM1O96005 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLPTM1O96005 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.33■□□□□ 0.21
CLPTM1O96005 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.33■□□□□ 0.21
CLPTM1O96005 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLPTM1O96005 SDHAP2-201ENST00000455183 2001 ntBASIC16.33■□□□□ 0.21
CLPTM1O96005 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLPTM1O96005 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLPTM1O96005 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLPTM1O96005 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.33■□□□□ 0.2
CLPTM1O96005 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLPTM1O96005 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.33■□□□□ 0.2
CLPTM1O96005 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLPTM1O96005 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLPTM1O96005 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLPTM1O96005 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.33■□□□□ 0.2
CLPTM1O96005 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CLPTM1O96005 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.33■□□□□ 0.2
CLPTM1O96005 C2orf69P3-201ENST00000565542 1120 ntBASIC16.33■□□□□ 0.2
CLPTM1O96005 LINC01451-201ENST00000623792 534 ntBASIC16.33■□□□□ 0.2
CLPTM1O96005 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLPTM1O96005 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLPTM1O96005 LINC01568-207ENST00000641790 1380 ntBASIC16.33■□□□□ 0.2
CLPTM1O96005 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLPTM1O96005 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.33■□□□□ 0.2
CLPTM1O96005 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.33■□□□□ 0.2
CLPTM1O96005 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLPTM1O96005 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLPTM1O96005 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLPTM1O96005 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CLPTM1O96005 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CLPTM1O96005 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
CLPTM1O96005 AL365203.3-201ENST00000609742 2057 ntBASIC16.33■□□□□ 0.2
CLPTM1O96005 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLPTM1O96005 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLPTM1O96005 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLPTM1O96005 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLPTM1O96005 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CLPTM1O96005 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLPTM1O96005 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLPTM1O96005 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLPTM1O96005 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPTM1O96005 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPTM1O96005 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CLPTM1O96005 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPTM1O96005 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPTM1O96005 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CLPTM1O96005 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.32■□□□□ 0.2
CLPTM1O96005 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPTM1O96005 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CLPTM1O96005 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPTM1O96005 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.32■□□□□ 0.2
CLPTM1O96005 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPTM1O96005 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLPTM1O96005 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLPTM1O96005 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPTM1O96005 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
CLPTM1O96005 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPTM1O96005 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPTM1O96005 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms