Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PDCD6O75340 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.59□□□□□ -0.07
PDCD6O75340 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDCD6O75340 PCDHB19P-201ENST00000570871 2371 ntBASIC14.59□□□□□ -0.07
PDCD6O75340 UBALD1-205ENST00000590891 2641 ntBASIC14.59□□□□□ -0.07
PDCD6O75340 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PDCD6O75340 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
PDCD6O75340 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
PDCD6O75340 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDCD6O75340 AL353593.2-201ENST00000602529 1483 ntBASIC14.58□□□□□ -0.08
PDCD6O75340 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDCD6O75340 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDCD6O75340 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.58□□□□□ -0.08
PDCD6O75340 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDCD6O75340 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDCD6O75340 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDCD6O75340 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDCD6O75340 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDCD6O75340 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.58□□□□□ -0.08
PDCD6O75340 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDCD6O75340 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDCD6O75340 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
PDCD6O75340 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.58□□□□□ -0.08
PDCD6O75340 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
PDCD6O75340 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.58□□□□□ -0.08
PDCD6O75340 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDCD6O75340 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.58□□□□□ -0.08
PDCD6O75340 AC211429.1-201ENST00000415277 523 ntBASIC14.58□□□□□ -0.08
PDCD6O75340 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.58□□□□□ -0.08
PDCD6O75340 AC246785.2-201ENST00000432512 513 ntBASIC14.58□□□□□ -0.08
PDCD6O75340 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.58□□□□□ -0.08
PDCD6O75340 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.58□□□□□ -0.08
PDCD6O75340 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDCD6O75340 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.58□□□□□ -0.08
PDCD6O75340 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.58□□□□□ -0.08
PDCD6O75340 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.58□□□□□ -0.08
PDCD6O75340 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.08
PDCD6O75340 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDCD6O75340 AC011498.5-201ENST00000592027 486 ntBASIC14.58□□□□□ -0.08
PDCD6O75340 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDCD6O75340 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDCD6O75340 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDCD6O75340 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.58□□□□□ -0.08
PDCD6O75340 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDCD6O75340 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.58□□□□□ -0.08
PDCD6O75340 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDCD6O75340 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDCD6O75340 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
PDCD6O75340 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.58□□□□□ -0.08
PDCD6O75340 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDCD6O75340 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PDCD6O75340 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PDCD6O75340 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDCD6O75340 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.58□□□□□ -0.08
PDCD6O75340 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDCD6O75340 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDCD6O75340 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDCD6O75340 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.57□□□□□ -0.08
PDCD6O75340 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
PDCD6O75340 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDCD6O75340 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDCD6O75340 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDCD6O75340 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PDCD6O75340 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDCD6O75340 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDCD6O75340 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDCD6O75340 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.57□□□□□ -0.08
PDCD6O75340 AC009336.1-201ENST00000608941 1553 ntBASIC14.57□□□□□ -0.08
PDCD6O75340 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDCD6O75340 AC078925.2-201ENST00000624013 1973 ntBASIC14.57□□□□□ -0.08
PDCD6O75340 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDCD6O75340 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDCD6O75340 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.57□□□□□ -0.08
PDCD6O75340 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.57□□□□□ -0.08
PDCD6O75340 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDCD6O75340 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.57□□□□□ -0.08
PDCD6O75340 STK19B-204ENST00000512515 211 ntBASIC14.57□□□□□ -0.08
PDCD6O75340 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.57□□□□□ -0.08
PDCD6O75340 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.57□□□□□ -0.08
PDCD6O75340 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
PDCD6O75340 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PDCD6O75340 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDCD6O75340 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PDCD6O75340 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.57□□□□□ -0.08
PDCD6O75340 AL135999.2-201ENST00000622438 1686 ntBASIC14.57□□□□□ -0.08
PDCD6O75340 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDCD6O75340 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.57□□□□□ -0.08
PDCD6O75340 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDCD6O75340 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDCD6O75340 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.57□□□□□ -0.08
PDCD6O75340 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
PDCD6O75340 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDCD6O75340 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDCD6O75340 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDCD6O75340 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.56□□□□□ -0.08
PDCD6O75340 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.56□□□□□ -0.08
PDCD6O75340 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.56□□□□□ -0.08
PDCD6O75340 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDCD6O75340 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PDCD6O75340 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms