Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD6O43541 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.38■□□□□ 0.37
SMAD6O43541 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD6O43541 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD6O43541 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SMAD6O43541 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD6O43541 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD6O43541 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.38■□□□□ 0.37
SMAD6O43541 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD6O43541 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD6O43541 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD6O43541 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD6O43541 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD6O43541 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD6O43541 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD6O43541 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD6O43541 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SMAD6O43541 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD6O43541 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.37■□□□□ 0.37
SMAD6O43541 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
SMAD6O43541 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD6O43541 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD6O43541 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SMAD6O43541 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.37■□□□□ 0.37
SMAD6O43541 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.37■□□□□ 0.37
SMAD6O43541 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.37■□□□□ 0.37
SMAD6O43541 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.37■□□□□ 0.37
SMAD6O43541 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.37■□□□□ 0.37
SMAD6O43541 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.37■□□□□ 0.37
SMAD6O43541 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.37■□□□□ 0.37
SMAD6O43541 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD6O43541 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD6O43541 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.37■□□□□ 0.37
SMAD6O43541 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD6O43541 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD6O43541 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD6O43541 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
SMAD6O43541 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMAD6O43541 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SMAD6O43541 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SMAD6O43541 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.36■□□□□ 0.37
SMAD6O43541 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.36■□□□□ 0.37
SMAD6O43541 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SMAD6O43541 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SMAD6O43541 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.36■□□□□ 0.37
SMAD6O43541 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMAD6O43541 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SMAD6O43541 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SMAD6O43541 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.36■□□□□ 0.37
SMAD6O43541 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMAD6O43541 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SMAD6O43541 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SMAD6O43541 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMAD6O43541 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.36■□□□□ 0.37
SMAD6O43541 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMAD6O43541 AC010507.1-201ENST00000633895 436 ntBASIC17.36■□□□□ 0.37
SMAD6O43541 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.36■□□□□ 0.37
SMAD6O43541 AC092865.6-201ENST00000642101 219 ntBASIC17.36■□□□□ 0.37
SMAD6O43541 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMAD6O43541 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SMAD6O43541 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SMAD6O43541 AC106820.2-201ENST00000563775 3264 ntBASIC17.36■□□□□ 0.37
SMAD6O43541 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMAD6O43541 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.36■□□□□ 0.37
SMAD6O43541 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMAD6O43541 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.36■□□□□ 0.37
SMAD6O43541 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMAD6O43541 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SMAD6O43541 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMAD6O43541 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMAD6O43541 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMAD6O43541 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMAD6O43541 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD6O43541 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
SMAD6O43541 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD6O43541 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD6O43541 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD6O43541 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.35■□□□□ 0.37
SMAD6O43541 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD6O43541 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD6O43541 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD6O43541 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SMAD6O43541 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SMAD6O43541 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.35■□□□□ 0.37
SMAD6O43541 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD6O43541 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.35■□□□□ 0.37
SMAD6O43541 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD6O43541 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.35■□□□□ 0.37
SMAD6O43541 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.35■□□□□ 0.37
SMAD6O43541 AC002310.6-201ENST00000624451 1377 ntBASIC17.35■□□□□ 0.37
SMAD6O43541 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.35■□□□□ 0.37
SMAD6O43541 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD6O43541 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.35■□□□□ 0.37
SMAD6O43541 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD6O43541 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD6O43541 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.35■□□□□ 0.37
SMAD6O43541 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.35■□□□□ 0.37
SMAD6O43541 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SMAD6O43541 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD6O43541 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms