Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.35■□□□□ 0.53
HOXA2O43364 AC093520.2-201ENST00000561830 333 ntBASIC18.35■□□□□ 0.53
HOXA2O43364 AL135744.1-201ENST00000565098 629 ntBASIC18.35■□□□□ 0.53
HOXA2O43364 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.35■□□□□ 0.53
HOXA2O43364 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.35■□□□□ 0.53
HOXA2O43364 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.35■□□□□ 0.53
HOXA2O43364 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.35■□□□□ 0.53
HOXA2O43364 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA2O43364 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA2O43364 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA2O43364 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA2O43364 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HOXA2O43364 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HOXA2O43364 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXA2O43364 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXA2O43364 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HOXA2O43364 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HOXA2O43364 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXA2O43364 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.34■□□□□ 0.53
HOXA2O43364 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.34■□□□□ 0.53
HOXA2O43364 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.34■□□□□ 0.53
HOXA2O43364 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HOXA2O43364 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HOXA2O43364 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HOXA2O43364 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.34■□□□□ 0.53
HOXA2O43364 HMGA1P7-201ENST00000406908 502 ntBASIC18.34■□□□□ 0.53
HOXA2O43364 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.34■□□□□ 0.53
HOXA2O43364 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.34■□□□□ 0.53
HOXA2O43364 CNN2P2-201ENST00000443536 909 ntBASIC18.34■□□□□ 0.53
HOXA2O43364 CNN2P3-201ENST00000450201 906 ntBASIC18.34■□□□□ 0.53
HOXA2O43364 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.34■□□□□ 0.53
HOXA2O43364 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
HOXA2O43364 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.34■□□□□ 0.53
HOXA2O43364 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.34■□□□□ 0.53
HOXA2O43364 AL096865.1-201ENST00000606796 927 ntBASIC18.34■□□□□ 0.53
HOXA2O43364 AC244517.3-201ENST00000616254 1235 ntBASIC18.34■□□□□ 0.53
HOXA2O43364 AL136317.3-201ENST00000618497 906 ntBASIC18.34■□□□□ 0.53
HOXA2O43364 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.34■□□□□ 0.53
HOXA2O43364 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.34■□□□□ 0.53
HOXA2O43364 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.34■□□□□ 0.53
HOXA2O43364 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
HOXA2O43364 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HOXA2O43364 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HOXA2O43364 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HOXA2O43364 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HOXA2O43364 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HOXA2O43364 AC090340.1-201ENST00000620778 4980 ntBASIC18.33■□□□□ 0.53
HOXA2O43364 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXA2O43364 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HOXA2O43364 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.33■□□□□ 0.52
HOXA2O43364 KRT18P32-201ENST00000424695 1287 ntBASIC18.33■□□□□ 0.52
HOXA2O43364 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HOXA2O43364 AC109635.5-201ENST00000533593 962 ntBASIC18.33■□□□□ 0.52
HOXA2O43364 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.33■□□□□ 0.52
HOXA2O43364 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.33■□□□□ 0.52
HOXA2O43364 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
HOXA2O43364 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HOXA2O43364 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXA2O43364 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
HOXA2O43364 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HOXA2O43364 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXA2O43364 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.33■□□□□ 0.52
HOXA2O43364 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HOXA2O43364 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXA2O43364 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.32■□□□□ 0.52
HOXA2O43364 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA2O43364 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA2O43364 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA2O43364 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA2O43364 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA2O43364 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA2O43364 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HOXA2O43364 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HOXA2O43364 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA2O43364 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA2O43364 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA2O43364 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
HOXA2O43364 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA2O43364 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA2O43364 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA2O43364 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA2O43364 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA2O43364 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA2O43364 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA2O43364 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.32■□□□□ 0.52
HOXA2O43364 AC069335.1-201ENST00000489972 472 ntBASIC18.32■□□□□ 0.52
HOXA2O43364 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.32■□□□□ 0.52
HOXA2O43364 AC243562.1-201ENST00000560672 389 ntBASIC18.32■□□□□ 0.52
HOXA2O43364 AL009183.1-201ENST00000603760 355 ntBASIC18.32■□□□□ 0.52
HOXA2O43364 AC087289.5-201ENST00000586076 3175 ntBASIC18.32■□□□□ 0.52
HOXA2O43364 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HOXA2O43364 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA2O43364 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA2O43364 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA2O43364 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA2O43364 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA2O43364 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA2O43364 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA2O43364 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.32■□□□□ 0.52
HOXA2O43364 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms