Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEMA3EO15041 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SEMA3EO15041 AP000344.2-201ENST00000512987 629 ntBASIC20.64■□□□□ 0.89
SEMA3EO15041 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.64■□□□□ 0.89
SEMA3EO15041 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.64■□□□□ 0.89
SEMA3EO15041 THTPA-204ENST00000554970 569 ntTSL 4 BASIC20.64■□□□□ 0.89
SEMA3EO15041 THTPA-206ENST00000556015 535 ntTSL 3 BASIC20.64■□□□□ 0.89
SEMA3EO15041 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SEMA3EO15041 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SEMA3EO15041 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SEMA3EO15041 AL596442.2-201ENST00000610240 980 ntBASIC20.64■□□□□ 0.89
SEMA3EO15041 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
SEMA3EO15041 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SEMA3EO15041 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEMA3EO15041 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.64■□□□□ 0.89
SEMA3EO15041 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SEMA3EO15041 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SEMA3EO15041 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEMA3EO15041 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.64■□□□□ 0.89
SEMA3EO15041 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SEMA3EO15041 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SEMA3EO15041 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA3EO15041 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SEMA3EO15041 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
SEMA3EO15041 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SEMA3EO15041 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA3EO15041 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA3EO15041 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA3EO15041 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA3EO15041 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA3EO15041 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SEMA3EO15041 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.63■□□□□ 0.89
SEMA3EO15041 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.63■□□□□ 0.89
SEMA3EO15041 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA3EO15041 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
SEMA3EO15041 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA3EO15041 AC005332.8-201ENST00000622750 2735 ntBASIC20.63■□□□□ 0.89
SEMA3EO15041 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA3EO15041 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SEMA3EO15041 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA3EO15041 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA3EO15041 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SEMA3EO15041 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.63■□□□□ 0.89
SEMA3EO15041 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA3EO15041 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.62■□□□□ 0.89
SEMA3EO15041 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA3EO15041 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA3EO15041 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.62■□□□□ 0.89
SEMA3EO15041 AL353732.1-201ENST00000569618 1459 ntBASIC20.62■□□□□ 0.89
SEMA3EO15041 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.62■□□□□ 0.89
SEMA3EO15041 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA3EO15041 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA3EO15041 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA3EO15041 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA3EO15041 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.62■□□□□ 0.89
SEMA3EO15041 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA3EO15041 PMS2P2-201ENST00000425039 1128 ntBASIC20.62■□□□□ 0.89
SEMA3EO15041 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA3EO15041 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA3EO15041 DUX4L17-201ENST00000557360 1267 ntBASIC20.62■□□□□ 0.89
SEMA3EO15041 AC091167.2-201ENST00000579581 588 ntBASIC20.62■□□□□ 0.89
SEMA3EO15041 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.62■□□□□ 0.89
SEMA3EO15041 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.62■□□□□ 0.89
SEMA3EO15041 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA3EO15041 AL121761.2-201ENST00000598007 1648 ntBASIC20.62■□□□□ 0.89
SEMA3EO15041 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA3EO15041 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA3EO15041 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.62■□□□□ 0.89
SEMA3EO15041 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC20.62■□□□□ 0.89
SEMA3EO15041 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA3EO15041 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.62■□□□□ 0.89
SEMA3EO15041 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.62■□□□□ 0.89
SEMA3EO15041 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.62■□□□□ 0.89
SEMA3EO15041 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA3EO15041 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA3EO15041 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.61■□□□□ 0.89
SEMA3EO15041 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SEMA3EO15041 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA3EO15041 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.61■□□□□ 0.89
SEMA3EO15041 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA3EO15041 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA3EO15041 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA3EO15041 TOP3BP1-201ENST00000420768 1380 ntBASIC20.61■□□□□ 0.89
SEMA3EO15041 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.61■□□□□ 0.89
SEMA3EO15041 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.61■□□□□ 0.89
SEMA3EO15041 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA3EO15041 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA3EO15041 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.61■□□□□ 0.89
SEMA3EO15041 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA3EO15041 ADH5P3-201ENST00000433842 1137 ntBASIC20.61■□□□□ 0.89
SEMA3EO15041 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA3EO15041 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.61■□□□□ 0.89
SEMA3EO15041 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
SEMA3EO15041 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.61■□□□□ 0.89
SEMA3EO15041 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC20.61■□□□□ 0.89
SEMA3EO15041 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.61■□□□□ 0.89
SEMA3EO15041 AL513210.1-201ENST00000629608 234 ntBASIC20.61■□□□□ 0.89
SEMA3EO15041 PCDHB18P-201ENST00000524813 2368 ntBASIC20.61■□□□□ 0.89
SEMA3EO15041 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.61■□□□□ 0.89
SEMA3EO15041 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms