Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1AO00322 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1AO00322 KRT8P10-201ENST00000450021 1447 ntBASIC16.37■□□□□ 0.21
UPK1AO00322 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.37■□□□□ 0.21
UPK1AO00322 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1AO00322 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1AO00322 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.37■□□□□ 0.21
UPK1AO00322 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1AO00322 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.37■□□□□ 0.21
UPK1AO00322 AC078925.2-201ENST00000624013 1973 ntBASIC16.37■□□□□ 0.21
UPK1AO00322 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1AO00322 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1AO00322 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
UPK1AO00322 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
UPK1AO00322 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1AO00322 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.37■□□□□ 0.21
UPK1AO00322 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1AO00322 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1AO00322 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.37■□□□□ 0.21
UPK1AO00322 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1AO00322 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.37■□□□□ 0.21
UPK1AO00322 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.37■□□□□ 0.21
UPK1AO00322 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.37■□□□□ 0.21
UPK1AO00322 AC093458.2-201ENST00000623150 629 ntBASIC16.37■□□□□ 0.21
UPK1AO00322 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
UPK1AO00322 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.37■□□□□ 0.21
UPK1AO00322 AC011270.2-201ENST00000624293 2550 ntBASIC16.37■□□□□ 0.21
UPK1AO00322 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.37■□□□□ 0.21
UPK1AO00322 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1AO00322 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1AO00322 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1AO00322 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1AO00322 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1AO00322 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1AO00322 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.37■□□□□ 0.21
UPK1AO00322 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1AO00322 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
UPK1AO00322 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1AO00322 AC092171.3-201ENST00000610122 2651 ntBASIC16.36■□□□□ 0.21
UPK1AO00322 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
UPK1AO00322 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1AO00322 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.36■□□□□ 0.21
UPK1AO00322 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1AO00322 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1AO00322 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.36■□□□□ 0.21
UPK1AO00322 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1AO00322 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1AO00322 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.36■□□□□ 0.21
UPK1AO00322 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.36■□□□□ 0.21
UPK1AO00322 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1AO00322 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1AO00322 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
UPK1AO00322 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1AO00322 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1AO00322 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1AO00322 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.36■□□□□ 0.21
UPK1AO00322 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.36■□□□□ 0.21
UPK1AO00322 AC104819.1-201ENST00000504587 486 ntBASIC16.36■□□□□ 0.21
UPK1AO00322 AC096582.2-201ENST00000510860 516 ntBASIC16.36■□□□□ 0.21
UPK1AO00322 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1AO00322 AC012615.1-201ENST00000565797 1299 ntBASIC16.36■□□□□ 0.21
UPK1AO00322 INTS4P1-201ENST00000438455 1935 ntBASIC16.36■□□□□ 0.21
UPK1AO00322 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1AO00322 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
UPK1AO00322 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1AO00322 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
UPK1AO00322 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1AO00322 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
UPK1AO00322 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1AO00322 LINC02012-201ENST00000608206 1725 ntBASIC16.36■□□□□ 0.21
UPK1AO00322 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.36■□□□□ 0.21
UPK1AO00322 AC006449.5-201ENST00000610658 2098 ntBASIC16.36■□□□□ 0.21
UPK1AO00322 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.36■□□□□ 0.21
UPK1AO00322 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.36■□□□□ 0.21
UPK1AO00322 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1AO00322 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.36■□□□□ 0.21
UPK1AO00322 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1AO00322 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1AO00322 AL353593.2-201ENST00000602529 1483 ntBASIC16.35■□□□□ 0.21
UPK1AO00322 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.35■□□□□ 0.21
UPK1AO00322 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.35■□□□□ 0.21
UPK1AO00322 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1AO00322 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.35■□□□□ 0.21
UPK1AO00322 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1AO00322 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1AO00322 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1AO00322 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
UPK1AO00322 PCDHB17P-201ENST00000539533 2393 ntBASIC16.35■□□□□ 0.21
UPK1AO00322 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1AO00322 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1AO00322 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
UPK1AO00322 RCN1P2-201ENST00000398357 915 ntBASIC16.35■□□□□ 0.21
UPK1AO00322 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.35■□□□□ 0.21
UPK1AO00322 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.35■□□□□ 0.21
UPK1AO00322 UPK3BP1-201ENST00000428678 509 ntBASIC16.35■□□□□ 0.21
UPK1AO00322 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1AO00322 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.35■□□□□ 0.21
UPK1AO00322 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1AO00322 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.35■□□□□ 0.21
UPK1AO00322 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms