Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
MBD3L5A6NJ08 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
MBD3L5A6NJ08 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.06■□□□□ 0
MBD3L5A6NJ08 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
MBD3L5A6NJ08 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
MBD3L5A6NJ08 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.06■□□□□ 0
MBD3L5A6NJ08 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MBD3L5A6NJ08 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.06■□□□□ 0
MBD3L5A6NJ08 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MBD3L5A6NJ08 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MBD3L5A6NJ08 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MBD3L5A6NJ08 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MBD3L5A6NJ08 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.06■□□□□ 0
MBD3L5A6NJ08 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
MBD3L5A6NJ08 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
MBD3L5A6NJ08 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MBD3L5A6NJ08 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MBD3L5A6NJ08 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MBD3L5A6NJ08 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.06■□□□□ 0
MBD3L5A6NJ08 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.06■□□□□ 0
MBD3L5A6NJ08 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.06■□□□□ 0
MBD3L5A6NJ08 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
MBD3L5A6NJ08 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.06■□□□□ 0
MBD3L5A6NJ08 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
MBD3L5A6NJ08 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.06■□□□□ 0
MBD3L5A6NJ08 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.06■□□□□ 0
MBD3L5A6NJ08 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.06■□□□□ 0
MBD3L5A6NJ08 AC134043.2-201ENST00000624206 2238 ntBASIC15.06■□□□□ 0
MBD3L5A6NJ08 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MBD3L5A6NJ08 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
MBD3L5A6NJ08 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.06■□□□□ 0
MBD3L5A6NJ08 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.06■□□□□ 0
MBD3L5A6NJ08 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.06■□□□□ 0
MBD3L5A6NJ08 AL353732.1-201ENST00000569618 1459 ntBASIC15.06■□□□□ 0
MBD3L5A6NJ08 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MBD3L5A6NJ08 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.06■□□□□ 0
MBD3L5A6NJ08 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
MBD3L5A6NJ08 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.06■□□□□ 0
MBD3L5A6NJ08 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MBD3L5A6NJ08 AC116353.5-201ENST00000638148 1699 ntBASIC15.06■□□□□ 0
MBD3L5A6NJ08 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.06■□□□□ 0
MBD3L5A6NJ08 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MBD3L5A6NJ08 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MBD3L5A6NJ08 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MBD3L5A6NJ08 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
MBD3L5A6NJ08 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
MBD3L5A6NJ08 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MBD3L5A6NJ08 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MBD3L5A6NJ08 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MBD3L5A6NJ08 AC004461.1-201ENST00000412461 403 ntBASIC15.05■□□□□ -0
MBD3L5A6NJ08 AL355306.1-201ENST00000415580 579 ntBASIC15.05■□□□□ -0
MBD3L5A6NJ08 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.05■□□□□ -0
MBD3L5A6NJ08 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.05■□□□□ -0
MBD3L5A6NJ08 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.05■□□□□ -0
MBD3L5A6NJ08 FAM86C2P-203ENST00000528684 1004 ntBASIC15.05■□□□□ -0
MBD3L5A6NJ08 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.05■□□□□ -0
MBD3L5A6NJ08 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.05■□□□□ -0
MBD3L5A6NJ08 AC022145.2-201ENST00000598203 171 ntBASIC15.05■□□□□ -0
MBD3L5A6NJ08 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.05■□□□□ -0
MBD3L5A6NJ08 LINC02084-201ENST00000606069 1096 ntBASIC15.05■□□□□ -0
MBD3L5A6NJ08 AC099522.2-201ENST00000607001 744 ntBASIC15.05■□□□□ -0
MBD3L5A6NJ08 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.05■□□□□ -0
MBD3L5A6NJ08 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MBD3L5A6NJ08 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
MBD3L5A6NJ08 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.05■□□□□ -0
MBD3L5A6NJ08 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MBD3L5A6NJ08 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.05■□□□□ -0
MBD3L5A6NJ08 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MBD3L5A6NJ08 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.05■□□□□ -0
MBD3L5A6NJ08 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
MBD3L5A6NJ08 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
MBD3L5A6NJ08 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MBD3L5A6NJ08 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.05■□□□□ -0
MBD3L5A6NJ08 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.05■□□□□ -0
MBD3L5A6NJ08 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MBD3L5A6NJ08 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MBD3L5A6NJ08 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
MBD3L5A6NJ08 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.04■□□□□ -0
MBD3L5A6NJ08 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
MBD3L5A6NJ08 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
MBD3L5A6NJ08 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
MBD3L5A6NJ08 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MBD3L5A6NJ08 AC012569.1-201ENST00000591191 1524 ntBASIC15.04■□□□□ -0
MBD3L5A6NJ08 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
MBD3L5A6NJ08 TOP3BP1-201ENST00000420768 1380 ntBASIC15.04■□□□□ -0
MBD3L5A6NJ08 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MBD3L5A6NJ08 HMGA1P7-201ENST00000406908 502 ntBASIC15.04■□□□□ -0
MBD3L5A6NJ08 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.04■□□□□ -0
MBD3L5A6NJ08 HCG4-201ENST00000418983 998 ntBASIC15.04■□□□□ -0
MBD3L5A6NJ08 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.04■□□□□ -0
MBD3L5A6NJ08 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.04■□□□□ -0
MBD3L5A6NJ08 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.04■□□□□ -0
MBD3L5A6NJ08 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.04■□□□□ -0
MBD3L5A6NJ08 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.04■□□□□ -0
MBD3L5A6NJ08 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.04■□□□□ -0
MBD3L5A6NJ08 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.04■□□□□ -0
MBD3L5A6NJ08 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.04■□□□□ -0
MBD3L5A6NJ08 AC091167.2-201ENST00000579581 588 ntBASIC15.04■□□□□ -0
MBD3L5A6NJ08 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.04■□□□□ -0
MBD3L5A6NJ08 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms